RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NDFIP2Q9NV92 336 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 TAS2R13Q9NYV9 303 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.7□□□□□ -1.53e-6■■□□□ 11.8
SYNCRIP-204ENST00000616122 VTI1BQ9UEU0 232 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CORO1CQ9ULV4 474 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RTTNQ86VV8 2226 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 EME2A4GXA9 379 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CAPN8A6NHC0 703 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ALDH2P05091 517 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ANPEPP15144 967 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 TSPAN8P19075 237 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CXCR3P49682 368 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 NME5P56597 212 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PTPRNQ16849 979 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF792Q3KQV3 632 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RETSATQ6NUM9 610 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 TMEM135Q86UB9 458 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDC26Q8NHZ8 85 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 SOCS4Q8WXH5 440 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 KCNN1Q92952 543 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ACBD6Q9BR61 282 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 EIF2B3Q9NR50 452 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 SNX10Q9Y5X0 201 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 SMCHD1A6NHR9 2005 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 F5H5T6 163 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 BAIAP3O94812 1187 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 DHRS4L1P0CG22 281 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ARHGEF6Q15052 776 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 POLD3Q15054 466 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 THEMIS2Q5TEJ8 643 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 NAIF1Q69YI7 327 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PQLC1Q8N2U9 271 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PTGR2Q8N8N7 351 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RAET1EQ8TD07 263 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 NXNL1Q96CM4 212 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CNDP1Q96KN2 507 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 POLR1EQ9GZS1 481 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 DRC3Q9H069 523 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRPM5Q9NZQ8 1165 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 WARS2Q9UGM6 360 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 MCM8Q9UJA3 840 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 VPS9D1Q9Y2B5 631 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 MYH6P13533 1939 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 E2F6O75461 281 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 COL6A2P12110 1019 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 VAV1P15498 845 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PIK3R1P27986 724 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 GMPRP36959 345 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 YBEYP58557 167 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PSME3P61289 254 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PLIN5Q00G26 463 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 LIPMQ5VYY2 423 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 AAGABQ6PD74 315 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF467Q7Z7K2 595 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RP9Q8TA86 221 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 KBTBD7Q8WVZ9 684 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 MTMR10Q9NXD2 777 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 STK39Q9UEW8 545 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 SEPT3Q9UH03 358 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PGM3O95394 542 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CHRNGP07510 517 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 GM2AP17900 193 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CD86P42081 329 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RGS4P49798 205 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 AFF1P51825 1210 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 NEK3P51956 506 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 INHBEP58166 350 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 POU4F1Q01851 419 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 TAF10Q12962 218 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDC16Q13042 620 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF177Q13360 481 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PSMD5Q16401 504 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 SAMD4BQ5PRF9 694 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RAP1GAP2Q684P5 730 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PTRHD1Q6GMV3 140 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PHTF2Q8N3S3 785 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 NPLOC4Q8TAT6 608 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 GDPD5Q8WTR4 605 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 MRPL57Q9BQC6 102 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PKD2L2Q9NZM6 624 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 FBXW11Q9UKB1 542 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CROTQ9UKG9 612 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC4A7Q9Y6M7 1214 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 NUP214P35658 2090 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 C2orf81A6NN90 581 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM72CH0Y354 149 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PTGESO14684 152 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SRP72O76094 671 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 F7P08709 466 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 LTA4HP09960 611 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 GCAP28676 217 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 OXCT1P55809 520 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 IRX1P78414 480 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PPIDQ08752 370 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PFKFB4Q16877 469 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 EML3Q32P44 896 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCDC157Q569K6 752 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM72AQ5TYM5 149 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM72DQ6L9T8 149 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms