RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 APOLD1Q96LR9 279 aa21.14■□□□□ 0.97
TRAPPC3-208ENST00000616074 NLGN3Q9NZ94 848 aa21.14■□□□□ 0.97
TRAPPC3-208ENST00000616074 PCDHB1Q9Y5F3 818 aa21.14■□□□□ 0.97
TRAPPC3-208ENST00000616074 LY6G6EA0A0G2JKS1 128 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 CXorf51AA0A1B0GTR3 108 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 C2CD4BA6NLJ0 364 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 NEBLO76041 1014 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 RHOQP17081 205 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 ETFBP38117 255 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 MAPKAPK2P49137 400 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 RYBPQ8N488 228 aaPredicted RBP21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 CCDC185Q8N715 623 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 GPT2Q8TD30 523 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 VOPP1Q96AW1 172 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 KLF6Q99612 283 aaPredicted RBP21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 OSBPL2Q9H1P3 480 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 VPS16Q9H269 839 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 TMEM248Q9NWD8 314 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 GGT7Q9UJ14 662 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 U3KQA8 63 aa21.13■□□□□ 0.97
TRAPPC3-208ENST00000616074 PTPRQQ9UMZ3 2332 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 SPTY2D1-AS1A0A0U1RR47 76 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 NEMP2A6NFY4 417 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 C16orf96A6NNT2 1141 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 K7ESM1 405 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 SCAMP1O15126 338 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 EPHB6O15197 1021 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 RRP8O43159 456 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 LRIG2O94898 1065 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 PTPN9P43378 593 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 JAM2P57087 298 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 POLR2FP61218 127 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 HNRNPKP61978 463 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 CT47A1Q5JQC4 288 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 TPRG1LQ5T0D9 272 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 CDCP2Q5VXM1 449 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 LEKR1Q6ZMV7 388 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 STRADAQ7RTN6 431 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 PLPP6Q8IY26 295 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 ZNF548Q8NEK5 533 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 BAP1Q92560 729 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 PRORYQ9H606 182 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 NLRC4Q9NPP4 1024 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 FAM207AQ9NSI2 230 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 ITM2BQ9Y287 266 aa21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 GCN1Q92616 2671 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-208ENST00000616074 IGLON5A6NGN9 336 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 SPINT1O43278 529 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 TSPAN6O43657 245 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 OPA1O60313 960 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 GSRP00390 522 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 CSF2P04141 144 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 NME1P15531 152 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 SOX5P35711 763 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 RABIFP47224 123 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 HDAC4P56524 1084 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 PTP4A2Q12974 167 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 PDE1CQ14123 709 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 KRT31Q15323 416 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 TBC1D25Q3MII6 688 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 ZNF805Q5CZA5 627 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 ZSCAN30Q86W11 494 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 PARGQ86W56 976 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 FAM181AQ8N9Y4 354 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 OR2AP1Q8NGE2 309 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 FAM172AQ8WUF8 416 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 CENPIQ92674 756 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 FGF11Q92914 225 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 TBC1D31Q96DN5 1066 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 LENG8Q96PV6 779 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 DUSP23Q9BVJ7 150 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 C1QTNF2Q9BXJ5 285 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 MAGEH1Q9H213 219 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 RETREG1Q9H6L5 497 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 KLF15Q9UIH9 416 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 RAI2Q9Y5P3 530 aa21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 COL27A1Q8IZC6 1860 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-208ENST00000616074 EIF4E1BA6NMX2 242 aaKnown RBP21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 KRIT1O00522 736 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 FPGTO14772 594 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 RAMP2O60895 175 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 UGT2B4P06133 528 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 GP1BAP07359 652 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 PLEKP08567 350 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 UNGP13051 313 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 ACTN2P35609 894 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 GEMIN4P57678 1058 aaKnown RBP21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 SGCGQ13326 291 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 POLD3Q15054 466 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 CDKAL1Q5VV42 579 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 ENOX1Q8TC92 643 aaKnown RBP21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 RAB7BQ96AH8 199 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 UBL7Q96S82 380 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 PCDHB18PQ96TA0 734 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 HPCAL4Q9UM19 191 aa21.1■□□□□ 0.97
TRAPPC3-208ENST00000616074 H3BM21 787 aa21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 NEMP1O14524 444 aa21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 SNRPD1P62314 119 aaKnown RBP21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 ATXN7L2Q5T6C5 722 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC3-208ENST00000616074 TRIM72Q6ZMU5 477 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms