RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 RPP25Q9BUL9 199 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 CPEB1Q9BZB8 566 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 GOLGA6AQ9NYA3 693 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 THAP10Q9P2Z0 257 aaPredicted RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 RPL26L1Q9UNX3 145 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ERVW-1Q9UQF0 538 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 NUP205Q92621 2012 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 TCF20Q9UGU0 1960 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 TSPAN11A1L157 253 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 SPECC1L-ADORA2AF8WAN1 911 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 POLR3GO15318 223 aaPredicted RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 TP73O15350 636 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 SOCS5O75159 536 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ANXA9O76027 345 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 TMCC1O94876 653 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 HLA-DQB2P05538 268 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 SRCP12931 536 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 IL9P15248 144 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 POLR2EP19388 210 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 MAGEA3P43357 314 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 PRPSAP1Q14558 356 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 LLGL1Q15334 1064 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 FBXO43Q4G163 708 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 KDELC1Q6UW63 502 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 PPP1R21Q6ZMI0 780 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ARHGEF18Q6ZSZ5 1173 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 GSTA5Q7RTV2 222 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 PPIL6Q8IXY8 311 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ZNF687Q8N1G0 1237 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 SYNPOQ8N3V7 929 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 NAT8LQ8N9F0 302 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 DRAXINQ8NBI3 349 aaPredicted RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ZNF483Q8TF39 744 aaPredicted RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 FRS2Q8WU20 508 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 MYO19Q96H55 970 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ZNF419Q96HQ0 510 aaPredicted RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ZFYVE19Q96K21 471 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 P2RY13Q9BPV8 354 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 OSBPL6Q9BZF3 934 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 POLR1EQ9GZS1 481 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ARNT2Q9HBZ2 717 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ZDHHC18Q9NUE0 388 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 RBM22Q9NW64 420 aaKnown RBP eCLIP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ELOVL2Q9NXB9 296 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 WNT16Q9UBV4 365 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 DMGDHQ9UI17 866 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 SORCS3Q9UPU3 1222 aa6.34□□□□□ -1.39
CBWD3-210ENST00000614398 AAR2Q9Y312 384 aaKnown RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ARIH1Q9Y4X5 557 aaPredicted RBP6.34□□□□□ -1.39
CBWD3-210ENST00000614398 ZNF106Q9H2Y7 1883 aaKnown RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 SHISA7A6NL88 538 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 SNAP91O60641 907 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 ZNF821O75541 412 aaPredicted RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 NEBLO76041 1014 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 KAT7O95251 611 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 AP2A1O95782 977 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 JCHAINP01591 159 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 MMP2P08253 660 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 MYBL2P10244 700 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 BMP1P13497 986 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 TSHRP16473 764 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 ADRA1AP35348 466 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 RPL21P46778 160 aaKnown RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 RPS6KA3P51812 740 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 SKOR1P84550 965 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 SLC10A7Q0GE19 358 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 ZNF235Q14590 738 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 PTPRNQ16849 979 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 SPDYCQ5MJ68 293 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 TMEM215Q68D42 235 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 C22orf39Q6P5X5 142 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 ZDHHC24Q6UX98 284 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 TRMT11Q7Z4G4 463 aaKnown RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 LINC00523Q86TU6 105 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 PGBD5Q8N414 524 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 GLIS1Q8NBF1 620 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 PRCCQ92733 491 aaPredicted RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 FEM1CQ96JP0 617 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 GDAP1L1Q96MZ0 367 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 FAM118BQ9BPY3 351 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 TRIM51Q9BSJ1 452 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 IER2Q9BTL4 223 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 SPON2Q9BUD6 331 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 CINPQ9BW66 212 aaPredicted RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 TMEM245Q9H330 911 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 LRRC40Q9H9A6 602 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 XAB2Q9HCS7 855 aaKnown RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 KLHL8Q9P2G9 620 aaPredicted RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 CPSF2Q9P2I0 782 aaKnown RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 LIMD1Q9UGP4 676 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 ATXN2Q99700 1313 aaKnown RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 MYOFQ9NZM1 2061 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 E7ESA3 106 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 KCNK1O00180 336 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 CBX4O00257 560 aa6.33□□□□□ -1.4
CBWD3-210ENST00000614398 SCAMP3O14828 347 aaKnown RBP6.33□□□□□ -1.4
CBWD3-210ENST00000614398 ZBTB24O43167 697 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms