RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CHMP5Q9NZZ3 219 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 PCDHB1Q9Y5F3 818 aa13.62□□□□□ -0.23
POLR2J3-219ENST00000608621 LY6G6EA0A0G2JKS1 128 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 SPTY2D1-AS1A0A0U1RR47 76 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 K7ESM1 405 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 FPGTO14772 594 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 TSPAN6O43657 245 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 GJB6O95452 261 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 CSF2P04141 144 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 RHOQP17081 205 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 MMP8P22894 467 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 SDC4P31431 198 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 ETFBP38117 255 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 ABL2P42684 1182 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 RABIFP47224 123 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 KLK7P49862 253 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 DUSP3P51452 185 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 FMO1Q01740 532 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 CDR2Q01850 454 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 NRG1Q02297 640 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 CCDC173Q0VFZ6 552 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 MANEALQ5VSG8 457 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 CDCP2Q5VXM1 449 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 KYAT3Q6YP21 454 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 LEKR1Q6ZMV7 388 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 NLRP14Q86W24 1093 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 FAM181AQ8N9Y4 354 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 OR6K2Q8NGY2 324 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 LENG8Q96PV6 779 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 UBL7Q96S82 380 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 KLF6Q99612 283 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 DUSP23Q9BVJ7 150 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 NUP62CLQ9H1M0 184 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 MAGEH1Q9H213 219 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 GANQ9H2C0 597 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 RETREG1Q9H6L5 497 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 GPR27Q9NS67 375 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 TMEM248Q9NWD8 314 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 NOCTQ9UK39 431 aaKnown RBP13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 U3KQA8 63 aa13.61□□□□□ -0.23
POLR2J3-219ENST00000608621 LOC400499M0QZD8 3231 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 CXorf51AA0A1B0GTR3 108 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 C2CD4BA6NLJ0 364 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 KRIT1O00522 736 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 NEMP1O14524 444 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 LRIG2O94898 1065 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 POP4O95707 220 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 PLEKP08567 350 aaPredicted RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 MAPKAPK2P49137 400 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 POLR2FP61218 127 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 SNRPD1P62314 119 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 PDE1CQ14123 709 aaPredicted RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 TBC1D25Q3MII6 688 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 ZNF805Q5CZA5 627 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 CT47A1Q5JQC4 288 aaPredicted RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 STRADAQ7RTN6 431 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 ZNF548Q8NEK5 533 aaPredicted RBP13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 OR2AP1Q8NGE2 309 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 RAB7BQ96AH8 199 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 VOPP1Q96AW1 172 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 KLHL32Q96NJ5 620 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 C11orf70Q9BRQ4 267 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 ABCG4Q9H172 646 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 NLRC4Q9NPP4 1024 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 KLF15Q9UIH9 416 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 GGT7Q9UJ14 662 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 PTPRQQ9UMZ3 2332 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 ITM2BQ9Y287 266 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 CSNK1G3Q9Y6M4 447 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 BPTFQ12830 3046 aa13.6□□□□□ -0.23
POLR2J3-219ENST00000608621 CPED1A4D0V7 1026 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 H3BM21 787 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 SPINT1O43278 529 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 KDELR3O43731 214 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 USP12O75317 370 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 GSRP00390 522 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 PRB1P04280 392 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 MPOP05164 745 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 UGT2B4P06133 528 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 GP1BAP07359 652 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 KRT3P12035 628 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 NME1P15531 152 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 JUNDP17535 347 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 SOX5P35711 763 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 PTPN9P43378 593 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 PTP4A2Q12974 167 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 ATXN7L2Q5T6C5 722 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 TTC7BQ86TV6 843 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 PARGQ86W56 976 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 CCDC185Q8N715 623 aa13.59□□□□□ -0.23
POLR2J3-219ENST00000608621 IFI44Q8TCB0 444 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms