RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 TFB1MQ8WVM0 346 aaKnown RBP10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 FCRL2Q96LA5 508 aaPredicted RBP10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 MED4Q9NPJ6 270 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 PRDM7Q9NQW5 492 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 PAK5Q9P286 719 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 VTI1BQ9UEU0 232 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZMYND8Q9ULU4 1186 aaPredicted RBP10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 YIPF1Q9Y548 306 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 INSL6Q9Y581 213 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 SLC4A7Q9Y6M7 1214 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 MYO9BQ13459 2157 aa10.08□□□□□ -0.8
CSNK1A1-209ENST00000606299 SLC12A8A0AV02 714 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 FAM92AA1XBS5 289 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 HACD1B0YJ81 288 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 GOLGA8MH3BSY2 632 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 PPP1R12AO14974 1030 aaPredicted RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ABLIM3O94929 683 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 SYF2O95926 243 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 TBX18O95935 607 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 VAV1P15498 845 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 EPHB2P29323 1055 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CTNNB1P35222 781 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 HCAR3P49019 387 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZNF135P52742 658 aaPredicted RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 HTRA4P83105 476 aaPredicted RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CREMQ03060 361 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 IFFO1Q0D2I5 559 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 TWF1Q12792 350 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 RAB33AQ14088 237 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 VEPH1Q14D04 833 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 PDK1Q15118 436 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 SPDYCQ5MJ68 293 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 SYCP2LQ5T4T6 812 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 FAXCQ5TGI0 409 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ANKRD22Q5VYY1 191 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 HEATR6Q6AI08 1181 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 LRIG3Q6UXM1 1119 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CEP128Q6ZU80 1094 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 HERC6Q8IVU3 1022 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 PPIL6Q8IXY8 311 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 IQCKQ8N0W5 287 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZCCHC9Q8N567 271 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ATP6V0D2Q8N8Y2 350 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CCNYQ8ND76 341 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 UHMK1Q8TAS1 419 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CCDC110Q8TBZ0 833 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 PIWIL2Q8TC59 973 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 PRCCQ92733 491 aaPredicted RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 TBC1D31Q96DN5 1066 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 RHOVQ96L33 236 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZNF512Q96ME7 567 aaPredicted RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 OLFM3Q96PB7 478 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 DPH2Q9BQC3 489 aaPredicted RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 TTLL2Q9BWV7 592 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 NACA2Q9H009 215 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 TSPYL1Q9H0U9 437 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZBP1Q9H171 429 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 OSBPL2Q9H1P3 480 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 PABPC3Q9H361 631 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CDC42EP4Q9H3Q1 356 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CENPHQ9H3R5 247 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 SEMA4AQ9H3S1 761 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CCSER2Q9H7U1 834 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 USP29Q9HBJ7 922 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ATP13A1Q9HD20 1204 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 SAYSD1Q9NPB0 183 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 CLIC5Q9NZA1 410 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 SEPT10Q9P0V9 454 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 VPS18Q9P253 973 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 XPO7Q9UIA9 1087 aaKnown RBP10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 SHOC2Q9UQ13 582 aa10.07□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 TCRBV7S3A2A0A539 114 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 KCNU1A8MYU2 1149 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 GOLGA8KD6RF30 607 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 H3BS24 57 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 RIPK2O43353 540 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 TLR5O60602 858 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 STK10O94804 968 aaKnown RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 ACSL3O95573 720 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CBX7O95931 251 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 ZDHHC11BP0C7U3 371 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 SPATA31D3P0C874 917 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CSH1P0DML2 217 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CSH2P0DML3 217 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CTSAP10619 480 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 SLC2A3P11169 496 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 SERPINB6P35237 376 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 EPHB3P54753 998 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 GAD2Q05329 585 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 EIF4EBP2Q13542 120 aaPredicted RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 CAMK2GQ13555 558 aaPredicted RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 PRKD1Q15139 912 aaPredicted RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 UBAP2Q5T6F2 1119 aaKnown RBP10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 ARHGEF18Q6ZSZ5 1173 aa10.06□□□□□ -0.8
CSNK1A1-209ENST00000606299 SPATA31D4Q6ZUB0 917 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms