RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 CASTOR2A6NHX0 329 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 SH3BGRLO75368 114 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 PABPC1P11940 636 aaKnown RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 YWHAQP27348 245 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 PTPN11Q06124 597 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 COLGALT1Q8NBJ5 622 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 RCN3Q96D15 328 aa8.79□□□□□ -1
CSMD1-216ENST00000602557 MAGEB10Q96LZ2 347 aaPredicted RBP8.79□□□□□ -1
CSMD1-216ENST00000602557 A0A0A6YYK5 440 aaPredicted RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 SHOX2O60902 331 aaPredicted RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 NTSR2O95665 410 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SLC25A27O95847 323 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 C9P02748 559 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PMF1Q6P1K2 205 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 OFCC1Q8IZS5 231 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ACER1Q8TDN7 264 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SLC5A5Q92911 643 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SLC9A7Q96T83 725 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 RGS18Q9NS28 235 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SH3BP4Q9P0V3 963 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 LNPEPQ9UIQ6 1025 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 IQSEC2Q5JU85 1478 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PROSCO94903 275 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ARP10275 920 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 RAB25P57735 213 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PURAQ00577 322 aaKnown RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 C1QBPQ07021 282 aaKnown RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 PRKAA1Q13131 559 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TBX2Q13207 712 aaPredicted RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 RIPK1Q13546 671 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PARP6Q2NL67 630 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 CTXN3Q4LDR2 81 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SPPL2AQ8TCT8 520 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ERCC6L2Q5T890 1561 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ASXL3Q9C0F0 2248 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ARHGEF33A8MVX0 844 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 KPNA5O15131 536 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TRIM3O75382 744 aaPredicted RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 APOL3O95236 402 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 NPY2RP49146 381 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 LAMTOR4Q0VGL1 99 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 FRG1Q14331 258 aaKnown RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 TXNDC11Q6PKC3 985 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 MRPL48Q96GC5 212 aaKnown RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 HGH1Q9BTY7 390 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PSMD12O00232 456 aaPredicted RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 TSPAN3O60637 253 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SCGNO76038 276 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ATF6P18850 670 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TGFBR2P37173 567 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 RBBP4Q09028 425 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PON2Q15165 354 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ADAM32Q8TC27 787 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 LYVE1Q9Y5Y7 322 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 GNA12Q03113 381 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PKN1Q16512 942 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 KIAA0895Q8NCT3 520 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 FAM151AQ8WW52 585 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 DNAJC13O75165 2243 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 FYNP06241 537 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SUPT20HL2P0C7V6 817 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 CETPP11597 493 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PGAM1P18669 254 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SREBF1P36956 1147 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 NEK3P51956 506 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 GRIK3Q13003 919 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ULK3Q6PHR2 472 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 HPS6Q86YV9 775 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 MYLPFQ96A32 169 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 NFKBIZQ9BYH8 718 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ZMYM5Q9UJ78 669 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ZNF112Q9UJU3 913 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SLC12A8A0AV02 714 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TMEM114B3SHH9 223 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PDHA2P29803 388 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 RHOAP61586 193 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TMEM132BQ14DG7 1078 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PTF1AQ7RTS3 328 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SAMD3Q8N6K7 520 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 DENND6BQ8NEG7 585 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TPK1Q9H3S4 243 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 IKZF3Q9UKT9 509 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 BRWD1Q9NSI6 2320 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SNAP91O60641 907 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 CDKAL1Q5VV42 579 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 CIR1Q86X95 450 aaPredicted RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 HELQQ8TDG4 1101 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 PPP1R14AQ96A00 147 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TMEM106CQ9BVX2 250 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ZNF518BQ9C0D4 1074 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 SF3B1O75533 1304 aaKnown RBP eCLIP8.78□□□□□ -11e-7■■■■■ 172.3
CSMD1-216ENST00000602557 FAM205AQ6ZU69 1335 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 F9P00740 461 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 HPCAL1P37235 193 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 ING5Q8WYH8 240 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 MND1Q9BWT6 205 aa8.78□□□□□ -1
CSMD1-216ENST00000602557 TDRD1Q9BXT4 1180 aaKnown RBP8.78□□□□□ -1
CSMD1-216ENST00000602557 REEP1Q9H902 201 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms