RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CCDC25Q86WR0 208 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 PDIK1LQ8N165 341 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 AGGF1Q8N302 714 aaeCLIP14.95□□□□□ -0.027e-20■■■■□ 22.6
SHKBP1-211ENST00000595945 MRGPRX3Q96LB0 322 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 MRGPRX2Q96LB1 330 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 NSMCE3Q96MG7 304 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 NUDCD1Q96RS6 583 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 SEMA3CQ99985 751 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 WDR83Q9BRX9 315 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 FUT8Q9BYC5 575 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 EPB41L4BQ9H329 900 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 HAUS2Q9NVX0 235 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 GOLGA6AQ9NYA3 693 aa14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-211ENST00000595945 ATG2BQ96BY7 2078 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 TTC24A2A3L6 582 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 K7ERQ8 282 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 MAP2K7O14733 419 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 ZNF821O75541 412 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 GJB3O75712 270 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 ASLP04424 464 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SRCP12931 536 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 POLR2EP19388 210 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SP100P23497 879 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 EIF2DP41214 584 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 CD86P42081 329 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 MAGEA4P43358 317 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 CSNK1DP48730 415 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 LMAN1P49257 510 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 PMS2P54278 862 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 WNT3AP56704 352 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 ECT2LQ008S8 904 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 ITKQ08881 620 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 MESP2Q0VG99 397 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 PDIA2Q13087 525 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 OLIG2Q13516 323 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 CASP8Q14790 479 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SKIV2LQ15477 1246 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SMAD2Q15796 467 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 ITPRIPL2Q3MIP1 535 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 RALGPS1Q5JS13 557 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 DENND5AQ6IQ26 1287 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 RANBP10Q6VN20 620 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 TRMT10CQ7L0Y3 403 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 LINC00523Q86TU6 105 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SH2D3CQ8N5H7 860 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 ISG20Q96AZ6 181 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SIGLEC10Q96LC7 697 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 TBL1YQ9BQ87 522 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 CEP44Q9C0F1 390 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 CDC42EP4Q9H3Q1 356 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SEMA4AQ9H3S1 761 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SAYSD1Q9NPB0 183 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 GTSE1Q9NYZ3 720 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 NINJ2Q9NZG7 142 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 UBP1Q9NZI7 540 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 DEC1Q9P2X7 70 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 SLC25A13Q9UJS0 675 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 ERVW-1Q9UQF0 538 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 TTLL3Q9Y4R7 772 aa14.94□□□□□ -0.02
SHKBP1-211ENST00000595945 CKAP5Q14008 2032 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 INSIG1O15503 277 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 ATP9BO43861 1147 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 BANF1O75531 89 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 HSD17B3P37058 310 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 TNNT3P45378 269 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 STK19P49842 368 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 RHOAP61586 193 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 FASTKD3Q14CZ7 662 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 AAK1Q2M2I8 961 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 BBS9Q3SYG4 887 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 DNAJC21Q5F1R6 531 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 DGKKQ5KSL6 1271 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 UBAP2Q5T6F2 1119 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 NAPEPLDQ6IQ20 393 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 NCEH1Q6PIU2 408 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 SRLQ86TD4 932 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 OR52K1Q8NGK4 314 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 PPM1EQ8WY54 764 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 NXPE3Q969Y0 559 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 LRRC39Q96DD0 335 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 MYO19Q96H55 970 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 FICDQ9BVA6 458 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 BRD9Q9H8M2 597 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 ARNT2Q9HBZ2 717 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 NOD2Q9HC29 1040 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 TRPV5Q9NQA5 729 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 TEX264Q9Y6I9 313 aa14.93□□□□□ -0.02
SHKBP1-211ENST00000595945 LOC285095A0A1B0GVY8 99 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 PRRT4C9JH25 899 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 ATP8B1O43520 1251 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 USP12O75317 370 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 AVILO75366 819 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 PMPCBO75439 489 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 SASH3O75995 380 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 GSRP00390 522 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 AGTP01019 485 aa14.92□□□□□ -0.02
SHKBP1-211ENST00000595945 SRPRAP08240 638 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms