RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CHD5Q8TDI0 1954 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 WASH4PA8MWX3 477 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 KRIT1O00522 736 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 ENC1O14682 589 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 GZMAP12544 262 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 PSMA2P25787 234 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 PRKCIP41743 596 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 RPS21P63220 83 aaKnown RBP23.86■■□□□ 1.41
LSM4-204ENST00000594828 MYLK3Q32MK0 819 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 TMEM259Q4ZIN3 620 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 KIAA1161Q6NSJ0 714 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 PARS2Q7L3T8 475 aaKnown RBP23.86■■□□□ 1.41
LSM4-204ENST00000594828 SLC17A9Q9BYT1 436 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 EDEM3Q9BZQ6 932 aa23.86■■□□□ 1.41
LSM4-204ENST00000594828 C16orf96A6NNT2 1141 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 RASA4BC9J798 803 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 FGF10O15520 208 aaPredicted RBP23.85■■□□□ 1.41
LSM4-204ENST00000594828 ATMINO43313 823 aaPredicted RBP23.85■■□□□ 1.41
LSM4-204ENST00000594828 RASA4O43374 803 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 AP1G1O43747 822 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 FTLP02792 175 aaPredicted RBP23.85■■□□□ 1.41
LSM4-204ENST00000594828 KLHL30Q0D2K2 578 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 MAPK8IP2Q13387 824 aaPredicted RBP23.85■■□□□ 1.41
LSM4-204ENST00000594828 PARP15Q460N3 678 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 ZNF805Q5CZA5 627 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 E4F1Q66K89 784 aaPredicted RBP23.85■■□□□ 1.41
LSM4-204ENST00000594828 DNAAF5Q86Y56 855 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 GALNT15Q8N3T1 639 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 CASKIN2Q8WXE0 1202 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 HMCESQ96FZ2 354 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 OSBPL1AQ9BXW6 950 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 HS3ST3A1Q9Y663 406 aa23.85■■□□□ 1.41
LSM4-204ENST00000594828 SYCE3A1L190 88 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 TMEM191CA6NGB0 347 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 TMCC1O94876 653 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 PAK4O96013 591 aaPredicted RBP23.84■■□□□ 1.41
LSM4-204ENST00000594828 UGT2B4P06133 528 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 HTR7P34969 479 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 CLDN2P57739 230 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 TPI1P60174 286 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 RAD51Q06609 339 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 INO80DQ53TQ3 878 aaPredicted RBP23.84■■□□□ 1.41
LSM4-204ENST00000594828 ATXN7L2Q5T6C5 722 aaPredicted RBP23.84■■□□□ 1.41
LSM4-204ENST00000594828 KANSL1Q7Z3B3 1105 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 UMODL1-AS1Q8N2C9 162 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 FAM174AQ8TBP5 190 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 RAB7BQ96AH8 199 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 CALN1Q9BXU9 219 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 TTYH3Q9C0H2 523 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 KLC2Q9H0B6 622 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 GPATCH2LQ9NWQ4 482 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 DONSONQ9NYP3 566 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 AP4E1Q9UPM8 1137 aa23.84■■□□□ 1.41
LSM4-204ENST00000594828 COL5A1P20908 1838 aaPredicted RBP23.83■■□□□ 1.41
LSM4-204ENST00000594828 DDX3XO00571 662 aaKnown RBP eCLIP23.83■■□□□ 1.411e-52■■■■■ 70.2
LSM4-204ENST00000594828 TSPAN6O43657 245 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 SDC3O75056 442 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 SKILP12757 684 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 TPM4P67936 248 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 SERINC3Q13530 473 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 ERMARDQ5T6L9 678 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 DHRS13Q6UX07 377 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 ZSCAN30Q86W11 494 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 OR13H1Q8NG92 308 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 GDAP1L1Q96MZ0 367 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 KLHL32Q96NJ5 620 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 DHX35Q9H5Z1 703 aaKnown RBP23.83■■□□□ 1.41
LSM4-204ENST00000594828 KLHL11Q9NVR0 708 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 CNOT8Q9UFF9 292 aaKnown RBP23.83■■□□□ 1.41
LSM4-204ENST00000594828 PCSK1NQ9UHG2 260 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 PCDHGA1Q9Y5H4 931 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 USP24Q9UPU5 2620 aa23.83■■□□□ 1.41
LSM4-204ENST00000594828 PTPRBP23467 1997 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 AKAP13Q12802 2813 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 SRRM3A6NNA2 597 aaPredicted RBP23.82■■□□□ 1.4
LSM4-204ENST00000594828 EIF3CLB5ME19 914 aaKnown RBP23.82■■□□□ 1.4
LSM4-204ENST00000594828 NEMP1O14524 444 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 RNF8O76064 485 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 IGSF6O95976 241 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 CAPNS1P04632 268 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 ABL2P42684 1182 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 RHOAP61586 193 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 DNAJC3Q13217 504 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 SGCGQ13326 291 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 FGL2Q14314 439 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 KLHL40Q2TBA0 621 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 FIGNQ5HY92 759 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 GDPD4Q6W3E5 623 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 GCNT7Q6ZNI0 430 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 Q6ZSR6 202 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 ABI3BPQ7Z7G0 1075 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 ARFGAP1Q8N6T3 406 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 NETO2Q8NC67 525 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 VOPP1Q96AW1 172 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 EIF3CQ99613 913 aaKnown RBP23.82■■□□□ 1.4
LSM4-204ENST00000594828 CBX8Q9HC52 389 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 PLXNB3Q9ULL4 1909 aa23.82■■□□□ 1.4
LSM4-204ENST00000594828 A6NNZ2 444 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 C1SP09871 688 aa23.81■■□□□ 1.4
LSM4-204ENST00000594828 CDK4P11802 303 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms