RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 CA9Q16790 459 aa15.52■□□□□ 0.08
TRIM28-203ENST00000593582 MYLK3Q32MK0 819 aa15.52■□□□□ 0.08
TRIM28-203ENST00000593582 INAVAQ3KP66 663 aa15.52■□□□□ 0.08
TRIM28-203ENST00000593582 INO80DQ53TQ3 878 aaPredicted RBP15.52■□□□□ 0.08
TRIM28-203ENST00000593582 GDAP1L1Q96MZ0 367 aa15.52■□□□□ 0.08
TRIM28-203ENST00000593582 PEBP4Q96S96 227 aa15.52■□□□□ 0.08
TRIM28-203ENST00000593582 OSBPL1AQ9BXW6 950 aa15.52■□□□□ 0.08
TRIM28-203ENST00000593582 XPO4Q9C0E2 1151 aaKnown RBP15.52■□□□□ 0.08
TRIM28-203ENST00000593582 WASF3Q9UPY6 502 aa15.52■□□□□ 0.08
TRIM28-203ENST00000593582 ACACBO00763 2458 aa15.52■□□□□ 0.07
TRIM28-203ENST00000593582 PCNX2A6NKB5 2137 aa15.52■□□□□ 0.07
TRIM28-203ENST00000593582 PLXNA2O75051 1894 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 YKT6O15498 198 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 CBFA2T2O43439 604 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 IGSF6O95976 241 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 PRLRP16471 622 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 AKT2P31751 481 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 CASP14P31944 242 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 GKP32189 559 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 PCK1P35558 622 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 ZNF135P52742 658 aaPredicted RBP15.51■□□□□ 0.07
TRIM28-203ENST00000593582 NXPH1P58417 271 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 RHOAP61586 193 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 RPS21P63220 83 aaKnown RBP15.51■□□□□ 0.07
TRIM28-203ENST00000593582 RAD51Q06609 339 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 ZNF284Q2VY69 593 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 ZNF805Q5CZA5 627 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 PPP6R3Q5H9R7 873 aaPredicted RBP15.51■□□□□ 0.07
TRIM28-203ENST00000593582 PRAMEF14Q5SWL7 426 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 ATXN7L2Q5T6C5 722 aaPredicted RBP15.51■□□□□ 0.07
TRIM28-203ENST00000593582 RFX8Q6ZV50 586 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 GLRX5Q86SX6 157 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 OXR1Q8N573 874 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 KLK6Q92876 244 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 FEM1CQ96JP0 617 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 KCTD15Q96SI1 283 aaPredicted RBP15.51■□□□□ 0.07
TRIM28-203ENST00000593582 SCNM1Q9BWG6 230 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 KLC2Q9H0B6 622 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 TSPY26PQ9H489 355 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 ERVMER34-1Q9H9K5 563 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 APOBEC2Q9Y235 224 aaKnown RBP15.51■□□□□ 0.07
TRIM28-203ENST00000593582 CHD8Q9HCK8 2581 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 WDFY3Q8IZQ1 3526 aa15.51■□□□□ 0.07
TRIM28-203ENST00000593582 TPRP12270 2363 aaKnown RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 CEP295Q9C0D2 2601 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 KNL1Q8NG31 2342 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 FRYQ5TBA9 3013 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 A0A087X0T9 212 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 ARHGAP42A6NI28 874 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 C16orf96A6NNT2 1141 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 NEMP1O14524 444 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 AP1G1O43747 822 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 HYAL3O43820 417 aaPredicted RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 TOP3BO95985 862 aaKnown RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 UGT2B4P06133 528 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 ITGAVP06756 1048 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 FTH1P19P0C7X4 201 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 FAM228BP0C875 321 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 SPINK2P20155 84 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 HNRNPA2B1P22626 353 aaKnown RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 PIGHQ14442 188 aaPredicted RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 TMEM259Q4ZIN3 620 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 SEL1L3Q68CR1 1132 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 KIAA1161Q6NSJ0 714 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 ALKBH5Q6P6C2 394 aaKnown RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 CYP4V2Q6ZWL3 525 aaPredicted RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 PARS2Q7L3T8 475 aaKnown RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 ZSCAN30Q86W11 494 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 TMEM145Q8NBT3 493 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 BAHD1Q8TBE0 780 aaPredicted RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 RAB7BQ96AH8 199 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 ARHGEF26Q96DR7 871 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 CELF6Q96J87 481 aaKnown RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 THAP2Q9H0W7 228 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 LRRC19Q9H756 370 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 ZWILCHQ9H900 591 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 UBA2Q9UBT2 640 aaPredicted RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 ZFR2Q9UPR6 939 aaKnown RBP15.5■□□□□ 0.07
TRIM28-203ENST00000593582 BTBD3Q9Y2F9 522 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 FADS3Q9Y5Q0 445 aa15.5■□□□□ 0.07
TRIM28-203ENST00000593582 TSPAN6O43657 245 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 ERCC2P18074 760 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 HCAR3P49019 387 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 MAPK8IP2Q13387 824 aaPredicted RBP15.49■□□□□ 0.07
TRIM28-203ENST00000593582 BOLA3Q53S33 107 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 CCDC122Q5T0U0 273 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 SPECC1LQ69YQ0 1117 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 GDPD4Q6W3E5 623 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 KLHDC7BQ96G42 594 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 KLHL32Q96NJ5 620 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 MYOCQ99972 504 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 NUP85Q9BW27 656 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 SLC17A9Q9BYT1 436 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 SLC39A8Q9C0K1 460 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 FZD3Q9NPG1 666 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 IP6K2Q9UHH9 426 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 ANAPC7Q9UJX3 599 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 CA5BQ9Y2D0 317 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 MFHAS1Q9Y4C4 1052 aa15.49■□□□□ 0.07
TRIM28-203ENST00000593582 NEUROG3Q9Y4Z2 214 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms