RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RAB44Q7Z6P3 723 aaPredicted RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 SLCO6A1Q86UG4 719 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 SPATS2Q86XZ4 545 aaKnown RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 UMODL1-AS1Q8N2C9 162 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 OR2AP1Q8NGE2 309 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 FNIP1Q8TF40 1166 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 CPLX3Q8WVH0 158 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 KCTD15Q96SI1 283 aaPredicted RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 CDC6Q99741 560 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 TMEM121BQ9BXQ6 578 aaPredicted RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 FZD3Q9NPG1 666 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 IFNKQ9P0W0 207 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 NEUROG3Q9Y4Z2 214 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 SCINQ9Y6U3 715 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 TDRD6O60522 2096 aaKnown RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 PLXNB3Q9ULL4 1909 aa14.11□□□□□ -0.15
APOC1-208ENST00000592535 COL5A1P20908 1838 aaPredicted RBP14.11□□□□□ -0.15
APOC1-208ENST00000592535 ANKRD36A6QL64 1941 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 EEF2KO00418 725 aaKnown RBP14.1□□□□□ -0.15
APOC1-208ENST00000592535 LRCH4O75427 683 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 RNF8O76064 485 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 ATXN1LP0C7T5 689 aaKnown RBP14.1□□□□□ -0.15
APOC1-208ENST00000592535 MYBL1P10243 752 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 HTR7P34969 479 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 ABL2P42684 1182 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 ZBED6P86452 979 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 SERINC3Q13530 473 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 MYLK3Q32MK0 819 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 PARP15Q460N3 678 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 FBXL19Q6PCT2 694 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 UNQ6494/PRO21346Q6UXR6 183 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 IQCHQ86VS3 1027 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 TMEM145Q8NBT3 493 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 ADAMTS14Q8WXS8 1223 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 SYN2Q92777 582 aaPredicted RBP14.1□□□□□ -0.15
APOC1-208ENST00000592535 TRIM11Q96F44 468 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 LRIG1Q96JA1 1093 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 GDAP1L1Q96MZ0 367 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.1□□□□□ -0.15
APOC1-208ENST00000592535 MRPL47Q9HD33 250 aaKnown RBP14.1□□□□□ -0.15
APOC1-208ENST00000592535 TOR4AQ9NXH8 423 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 CAPN11Q9UMQ6 739 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 APOBEC2Q9Y235 224 aaKnown RBP14.1□□□□□ -0.15
APOC1-208ENST00000592535 FADS3Q9Y5Q0 445 aa14.1□□□□□ -0.15
APOC1-208ENST00000592535 GOLGA8CPA6NN73 597 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 C16orf96A6NNT2 1141 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 EIF3CLB5ME19 914 aaKnown RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 PRPSAP2O60256 369 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 POP4O95707 220 aaKnown RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 GYPCP04921 128 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 SERPING1P05155 500 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 UGT2B4P06133 528 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 ITGAVP06756 1048 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 HNRNPA2B1P22626 353 aaKnown RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 EPHA8P29322 1005 aaPredicted RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 RHOAP61586 193 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 OVGP1Q12889 678 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 TMEM259Q4ZIN3 620 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 INO80DQ53TQ3 878 aaPredicted RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 ZNF805Q5CZA5 627 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 SAP25Q8TEE9 199 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 CASKIN2Q8WXE0 1202 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 GATA6Q92908 595 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 KLHDC7BQ96G42 594 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 CELF6Q96J87 481 aaKnown RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 KLHL32Q96NJ5 620 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 EIF3CQ99613 913 aaKnown RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 SLC39A8Q9C0K1 460 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 LRRC19Q9H756 370 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 ERVMER34-1Q9H9K5 563 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 PDFQ9HBH1 243 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 LHX3Q9UBR4 397 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 GGT7Q9UJ14 662 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 LUC7L2Q9Y383 392 aaKnown RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 MSRB2Q9Y3D2 182 aa14.09□□□□□ -0.15
APOC1-208ENST00000592535 BZW2Q9Y6E2 419 aaKnown RBP14.09□□□□□ -0.15
APOC1-208ENST00000592535 LRRK1Q38SD2 2015 aa14.08□□□□□ -0.15
APOC1-208ENST00000592535 A0A087X0T9 212 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 J3KR12 359 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 YKT6O15498 198 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 SPINT1O43278 529 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 AP1G1O43747 822 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 MAGEC1O60732 1142 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 IGSF6O95976 241 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 PROS1P07225 676 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 FAM228BP0C875 321 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 THEGLP0DJG4 465 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 ERCC2P18074 760 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 AKT2P31751 481 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 RXRGP48443 463 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 ARRB1P49407 418 aaPredicted RBP14.08□□□□□ -0.16
APOC1-208ENST00000592535 NDST2P52849 883 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 CLDN2P57739 230 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 BNIP3Q12983 259 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 MAPK8IP2Q13387 824 aaPredicted RBP14.08□□□□□ -0.16
APOC1-208ENST00000592535 FGL2Q14314 439 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 CYTH1Q15438 398 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 SKOR2Q2VWA4 1001 aaPredicted RBP14.08□□□□□ -0.16
APOC1-208ENST00000592535 INAVAQ3KP66 663 aa14.08□□□□□ -0.16
APOC1-208ENST00000592535 PPP6R3Q5H9R7 873 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms