RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CCDC70Q6NSX1 233 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 BBS12Q6ZW61 710 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 FAM217AQ8IXS0 508 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 FAM185AQ8N0U4 392 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 TTC30BQ8N4P2 665 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 TMEM199Q8N511 208 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 DPP10Q8N608 796 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 SETD9Q8NE22 299 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 MIPOL1Q8TD10 442 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 VCPIP1Q96JH7 1222 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 ZNF396Q96N95 335 aaPredicted RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 TRIM6Q9C030 488 aaPredicted RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 RETREG1Q9H6L5 497 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 TTC12Q9H892 705 aaPredicted RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 FZD3Q9NPG1 666 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 RNF146Q9NTX7 359 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 EXOC1Q9NV70 894 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 PLEKHB1Q9UF11 243 aaPredicted RBP3.71□□□□□ -1.82
VMP1-212ENST00000591782 SUN2Q9UH99 717 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 CDH22Q9UJ99 828 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 DHDHQ9UQ10 334 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 OSGIN2Q9Y236 505 aa3.71□□□□□ -1.82
VMP1-212ENST00000591782 MST1RQ04912 1400 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 EEA1Q15075 1411 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 FAM90A7PA6NKC0 464 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 SH2D7A6NKC9 451 aaPredicted RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 TRIM64CA6NLI5 447 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 FAM90A22PA8MWA6 464 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 FAM90A12PA8MX19 464 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 FAM90A23PA8MXZ1 464 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 NCAM2O15394 837 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 MTA2O94776 668 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TMCC1O94876 653 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 SYF2O95926 243 aaKnown RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 IFNA2P01563 188 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 UNGP13051 313 aaPredicted RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 TNFSF8P32971 234 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 CASP2P42575 452 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 KCNJ4P48050 445 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TMPRSS3P57727 454 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 NUCB2P80303 420 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TRAF1Q13077 416 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 PKP1Q13835 747 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 PTGR1Q14914 329 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 ZSCAN26Q16670 478 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 PRTGQ2VWP7 1150 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 ZNF260Q3ZCT1 412 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 LEXMQ3ZCV2 418 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 FBXO43Q4G163 708 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 SYTL3Q4VX76 610 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 CCDC158Q5M9N0 1113 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 MFSD4BQ5TF39 518 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TMEM268Q5VZI3 342 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 ATG16L1Q676U5 607 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 GJB7Q6PEY0 223 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 SEPT14Q6ZU15 432 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TRAPPC11Q7Z392 1133 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 TRIM74Q86UV6 250 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TRIM73Q86UV7 250 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 PIM3Q86V86 326 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 WDR5BQ86VZ2 330 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 NDUFAF2Q8N183 169 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 KDM1BQ8NB78 822 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 HDAC7Q8WUI4 952 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 INPP5DQ92835 1189 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 RSRC1Q96IZ7 334 aaKnown RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 MAELQ96JY0 434 aaKnown RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 TTC14Q96N46 770 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TEFMQ96QE5 360 aaKnown RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 CLSTN3Q9BQT9 956 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 PHF7Q9BWX1 381 aaPredicted RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 NPLQ9BXD5 320 aaPredicted RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 MAK16Q9BXY0 300 aaKnown RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 B3GNT4Q9C0J1 378 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 MROH8Q9H579 483 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TASP1Q9H6P5 420 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 VEZTQ9HBM0 779 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TMEM160Q9NX00 188 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 CPSF2Q9P2I0 782 aaKnown RBP3.7□□□□□ -1.82
VMP1-212ENST00000591782 TBC1D14Q9P2M4 693 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 NLKQ9UBE8 527 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 ACAD8Q9UKU7 415 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 TMCC3Q9ULS5 477 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 SUFUQ9UMX1 484 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 RAP2CQ9Y3L5 183 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 RAD50Q92878 1312 aa3.7□□□□□ -1.82
VMP1-212ENST00000591782 OR6C68A6NDL8 312 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 DDTLA6NHG4 134 aaPredicted RBP3.69□□□□□ -1.82
VMP1-212ENST00000591782 B4DGG1 531 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 H0YGN5 161 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 H3BNX3 289 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 ERLIN1O75477 346 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 BMP15O95972 392 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 PYGLP06737 847 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 TSPY4P0CV99 314 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 TSPY10P0CW01 314 aa3.69□□□□□ -1.82
VMP1-212ENST00000591782 USP8P40818 1118 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms