RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 SPINT1O43278 529 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 GFRA3O60609 400 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 GJB3O75712 270 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 RNASEH2AO75792 299 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 RHOBTB1O94844 696 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 ZRANB2O95218 330 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 POP4O95707 220 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 KRT10P13645 584 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 ITGB7P26010 798 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 DNA2P51530 1060 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 ADPRHP54922 357 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 RHOAP61586 193 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 ELF2Q15723 593 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 IFI16Q16666 785 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 POM121L1PQ3SYA9 428 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 TFDP3Q5H9I0 405 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 DCAF12L1Q5VU92 463 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 FAM46CQ5VWP2 391 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 NPNTQ6UXI9 565 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 LPCAT2Q7L5N7 544 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 HDDC3Q8N4P3 179 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 CADM4Q8NFZ8 388 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 C1orf216Q8TAB5 229 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 RUBCNQ92622 972 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 HDAC11Q96DB2 347 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 LRIG1Q96JA1 1093 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 EXOC2Q96KP1 924 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 GPR174Q9BXC1 333 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 HDAC8Q9BY41 377 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 CPEB1Q9BZB8 566 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 C6orf106Q9H6K1 298 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 SGK2Q9HBY8 427 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 PARD6AQ9NPB6 346 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 EVLQ9UI08 416 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 GUCA1BQ9UMX6 200 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 PACSIN2Q9UNF0 486 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 PCDHGA5Q9Y5G8 931 aa16.24■□□□□ 0.19
PRKCSH-213ENST00000591510 TSPAN11A1L157 253 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 APOL1O14791 398 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 SLC7A4O43246 635 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 PLRG1O43660 514 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 KRT86O43790 486 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 SEMA4FO95754 770 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 IGSF6O95976 241 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 IGHV4-34P06331 123 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 PECAM1P16284 738 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 RECQLP46063 649 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 NAP1L1P55209 391 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 COPS2P61201 443 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 PPIDQ08752 370 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 NSUN2Q08J23 767 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 IHHQ14623 411 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 LBRQ14739 615 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 ZFYVE27Q5T4F4 411 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 ALG1LQ6GMV1 187 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 BBS12Q6ZW61 710 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 PARS2Q7L3T8 475 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 RFX6Q8HWS3 928 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 SYCE1Q8N0S2 351 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 DCLK2Q8N568 766 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 LRRN4Q8WUT4 740 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 DNASE2BQ8WZ79 361 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 RBM41Q96IZ5 413 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 HSPA12BQ96MM6 686 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 MGME1Q9BQP7 344 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 BTBD1Q9H0C5 482 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 ZDHHC6Q9H6R6 413 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 SEPT3Q9UH03 358 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 AMFRQ9UKV5 643 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 RAB23Q9ULC3 237 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 EFR3BQ9Y2G0 817 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 FARP1Q9Y4F1 1045 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 SLCO1B1Q9Y6L6 691 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 PCDH15Q96QU1 1955 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 SPTBN4Q9H254 2564 aa16.23■□□□□ 0.19
PRKCSH-213ENST00000591510 METTL12A8MUP2 240 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 MIF4GDA9UHW6 222 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 KPNA3O00505 521 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 KRIT1O00522 736 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 MATN3O15232 486 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 MAP3K13O43283 966 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 LRP3O75074 770 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 PYGMP11217 842 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 ZFXP17010 805 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 MX2P20592 715 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 ITPKAP23677 461 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 CCNCP24863 283 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 ZNF33AQ06730 810 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 HNRNPDQ14103 355 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 TFDP2Q14188 446 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 LLGL1Q15334 1064 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 AADACL2Q6P093 401 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 NCEH1Q6PIU2 408 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 PEX26Q7Z412 305 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 REXO1L1PQ8IX06 675 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 DEFB119Q8N690 84 aa16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 ZNF830Q96NB3 372 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-213ENST00000591510 LGMNQ99538 433 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms