RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 PIGNO95427 931 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 PEX11BO96011 259 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 GSRP00390 522 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 UGT2B4P06133 528 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 MAT2AP31153 395 aaKnown RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 ARHGAP25P42331 645 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 RECQLP46063 649 aaPredicted RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 ZNF135P52742 658 aaPredicted RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 RHOAP61586 193 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 BNC1Q01954 994 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 GBE1Q04446 702 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 SLC10A7Q0GE19 358 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 SLC10A2Q12908 348 aaPredicted RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 AASDHQ4L235 1098 aaPredicted RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 INO80DQ53TQ3 878 aaPredicted RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 ZFYVE27Q5T4F4 411 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 FAM46CQ5VWP2 391 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 KIAA0895LQ68EN5 471 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 PARS2Q7L3T8 475 aaKnown RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 TMIEQ8NEW7 156 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 OR2AP1Q8NGE2 309 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 TPCN2Q8NHX9 752 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 KRT35Q92764 455 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 KLK6Q92876 244 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 FAM131CQ96AQ9 280 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 RNF25Q96BH1 459 aaPredicted RBP11.7□□□□□ -0.54
VMP1-211ENST00000591315 SP110Q9HB58 689 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 GGT7Q9UJ14 662 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 FZD4Q9ULV1 537 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 ALG6Q9Y672 507 aa11.7□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3DA0A087WVF3 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3IA0A087WXS9 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3EA0A087X179 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3KA0A087X1G2 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3FA6NER0 549 aaPredicted RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3LB9A6J9 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 KHNYNO15037 678 aaKnown RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 SPINT1O43278 529 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 PLRG1O43660 514 aaKnown RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 SPOPO43791 374 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 MAFKO60675 156 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 PALMO75781 387 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 PRNPP04156 253 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 KRT1P04264 644 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 KRT7P08729 469 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3HP0C7X1 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 ABL2P42684 1182 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 MAPK8P45983 427 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 GEMIN4P57678 1058 aaKnown RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 SNRPD1P62314 119 aaKnown RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 SEMG2Q02383 582 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 PDK2Q15119 407 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 DUOXA1Q1HG43 343 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 WDR45BQ5MNZ6 344 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 SYCP2LQ5T4T6 812 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3GQ6DHY5 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3CQ6IPX1 549 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 MFSD7Q6UXD7 560 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 NPNTQ6UXI9 565 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 B4GALNT4Q76KP1 1039 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 ERN2Q76MJ5 926 aaKnown RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 TBC1D3Q8IZP1 549 aaPredicted RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 PGBD5Q8N414 524 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 C12orf50Q8NA57 414 aaPredicted RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 OR2T34Q8NGX1 318 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 FOXJ1Q92949 421 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 FAF2Q96CS3 445 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 CCDC114Q96M63 670 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 SLC6A18Q96N87 628 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 KLHL32Q96NJ5 620 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 CAAP1Q9H8G2 361 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 CAPN10Q9HC96 672 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 RCOR3Q9P2K3 495 aaPredicted RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 ITM2BQ9Y287 266 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 CA5BQ9Y2D0 317 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 FARP1Q9Y4F1 1045 aaPredicted RBP11.69□□□□□ -0.54
VMP1-211ENST00000591315 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
VMP1-211ENST00000591315 CACNA1AO00555 2505 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 PCNX2A6NKB5 2137 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 A0A0A6YYK5 440 aaPredicted RBP11.68□□□□□ -0.54
VMP1-211ENST00000591315 CXorf51AA0A1B0GTR3 108 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 A0A1B0GVT2 93 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 LRRC72A6NJI9 287 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 C16orf96A6NNT2 1141 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 C4orf47A7E2U8 309 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 CDX4O14627 284 aaPredicted RBP11.68□□□□□ -0.54
VMP1-211ENST00000591315 KCNK3O14649 394 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 BCAT2O15382 392 aaPredicted RBP11.68□□□□□ -0.54
VMP1-211ENST00000591315 RNGTTO60942 597 aaKnown RBP11.68□□□□□ -0.54
VMP1-211ENST00000591315 POP4O95707 220 aaKnown RBP11.68□□□□□ -0.54
VMP1-211ENST00000591315 IGSF6O95976 241 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 PRKCGP05129 697 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 KRT10P13645 584 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 PRLRP16471 622 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 ENGP17813 658 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 ITGB7P26010 798 aa11.68□□□□□ -0.54
VMP1-211ENST00000591315 CSNK1EP49674 416 aaKnown RBP11.68□□□□□ -0.54
VMP1-211ENST00000591315 VAV2P52735 878 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms