RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SLC18A3Q16572 532 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 SMTNL2Q2TAL5 461 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 SETMARQ53H47 684 aaPredicted RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 INO80DQ53TQ3 878 aaPredicted RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 PIP5KL1Q5T9C9 394 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 H2AFVQ71UI9 128 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 CASKIN2Q8WXE0 1202 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 CTNNBL1Q8WYA6 563 aaPredicted RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 FAM131CQ96AQ9 280 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 FEM1CQ96JP0 617 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 CCDC42Q96M95 316 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 CHP1Q99653 195 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 PREBQ9HCU5 417 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 TM7SF3Q9NS93 570 aa12.28□□□□□ -0.44
TPM4-212ENST00000590180 UBA2Q9UBT2 640 aaPredicted RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
TPM4-212ENST00000590180 DCHS1Q96JQ0 3298 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 SPAARA0A1B0GVQ0 90 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 SSU72P8A0A1W2PR75 194 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 C16orf96A6NNT2 1141 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 UPK3BL1B0FP48 263 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 AKR1B15C9JRZ8 316 aaPredicted RBP12.27□□□□□ -0.45
TPM4-212ENST00000590180 UPK3BL2E5RIL1 263 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 H0Y8X5 98 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 J3KR12 359 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 NEMP1O14524 444 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 LATO43561 262 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 GJB3O75712 270 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 IGSF6O95976 241 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 WNT1P04628 370 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 UGT2B4P06133 528 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 TCF4P15884 667 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 ITGB7P26010 798 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 NUDT1P36639 197 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 CTSKP43235 329 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
TPM4-212ENST00000590180 KRT81Q14533 505 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 HADHQ16836 314 aaKnown RBP12.27□□□□□ -0.45
TPM4-212ENST00000590180 ZNF805Q5CZA5 627 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 NAPEPLDQ6IQ20 393 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 NEK5Q6P3R8 708 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 GDPD4Q6W3E5 623 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 CYP4V2Q6ZWL3 525 aaPredicted RBP12.27□□□□□ -0.45
TPM4-212ENST00000590180 TTC7BQ86TV6 843 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 TRIM69Q86WT6 500 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 HORMAD1Q86X24 394 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 ZNF564Q8TBZ8 553 aaPredicted RBP12.27□□□□□ -0.45
TPM4-212ENST00000590180 RHBDD1Q8TEB9 315 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 LRIG1Q96JA1 1093 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 GDAP1L1Q96MZ0 367 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 KLHL32Q96NJ5 620 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 CAMK1GQ96NX5 476 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 PACSIN1Q9BY11 444 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 NHEJ1Q9H9Q4 299 aaPredicted RBP12.27□□□□□ -0.45
TPM4-212ENST00000590180 ABHD10Q9NUJ1 306 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.27□□□□□ -0.45
TPM4-212ENST00000590180 DMTF1Q9Y222 760 aa12.27□□□□□ -0.45
TPM4-212ENST00000590180 A0A1W2PR77 199 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 TMEM110-MUSTN1A8MSY1 372 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 PRAMEF26H0Y7S4 382 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 TLR4O00206 839 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 INSIG1O15503 277 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 PRAMEF11O60813 436 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 MFAP3LO75121 409 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 PALMO75781 387 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 ADRB3P13945 408 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 PRLRP16471 622 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 SIM1P81133 766 aaPredicted RBP12.26□□□□□ -0.45
TPM4-212ENST00000590180 HNRNPDQ14103 355 aaKnown RBP12.26□□□□□ -0.45
TPM4-212ENST00000590180 ASTE1Q2TB18 679 aaPredicted RBP12.26□□□□□ -0.45
TPM4-212ENST00000590180 TXNRD3NBQ6F5E7 133 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 PARS2Q7L3T8 475 aaKnown RBP12.26□□□□□ -0.45
TPM4-212ENST00000590180 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 LZTR1Q8N653 840 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 MFSD2AQ8NA29 543 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 KLHDC7BQ96G42 594 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 EXOC2Q96KP1 924 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 MYOCQ99972 504 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 SP110Q9HB58 689 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 GDF3Q9NR23 364 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 NENFQ9UMX5 172 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 CA5BQ9Y2D0 317 aa12.26□□□□□ -0.45
TPM4-212ENST00000590180 DNAH14Q0VDD8 3507 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 PCDH15Q96QU1 1955 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 C10orf142B7Z368 130 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 DFNA5O60443 496 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 MAGEC1O60732 1142 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 PROSCO94903 275 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 PAK4O96013 591 aaPredicted RBP12.25□□□□□ -0.45
TPM4-212ENST00000590180 ZNF883P0CG24 379 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 XPAP23025 273 aaPredicted RBP12.25□□□□□ -0.45
TPM4-212ENST00000590180 AKT2P31751 481 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 GJC1P36383 396 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 CDH6P55285 790 aa12.25□□□□□ -0.45
TPM4-212ENST00000590180 RPS21P63220 83 aaKnown RBP12.25□□□□□ -0.45
TPM4-212ENST00000590180 FAM193AP78312 1265 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms