RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 IGHV4-34P06331 123 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 KDELR1P24390 212 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 SUOXP51687 545 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 AFF3P51826 1226 aaKnown RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 NEK3P51956 506 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ATXN3P54252 364 aaPredicted RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 TAS2R40P59535 323 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 RACK1P63244 317 aaKnown RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 DPYSL3Q14195 570 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 PAFAH1B3Q15102 231 aaKnown RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 CYTH1Q15438 398 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ATP13A4Q4VNC1 1196 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ODF2Q5BJF6 829 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ANKRD20A8PQ5CZ79 823 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ZNF805Q5CZA5 627 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 STPG1Q5TH74 334 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 AGBL4Q5VU57 503 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 TCEAL6Q6IPX3 200 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 FBXL19Q6PCT2 694 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 IL27RAQ6UWB1 636 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 LEKR1Q6ZMV7 388 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 PRPF39Q86UA1 669 aaKnown RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 TRIM69Q86WT6 500 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 RHOT1Q8IXI2 618 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 C1orf216Q8TAB5 229 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 GRIN3AQ8TCU5 1115 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 NSMCE1Q8WV22 266 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 SNX19Q92543 992 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 TCEAL3Q969E4 200 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 RAB7BQ96AH8 199 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ARRDC3Q96B67 414 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 RMDN1Q96DB5 314 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ZNF641Q96N77 438 aaPredicted RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 TUBGCP5Q96RT8 1024 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 EDEM2Q9BV94 578 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ZDHHC6Q9H6R6 413 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 TMEM9BQ9NQ34 198 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 DDX56Q9NY93 547 aaKnown RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 DMTF1Q9Y222 760 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 CHD5Q8TDI0 1954 aa10.26□□□□□ -0.77
TPM4-207ENST00000588032 ATXN2Q99700 1313 aaKnown RBP10.26□□□□□ -0.77
TPM4-207ENST00000588032 PTPRZ1P23471 2315 aaPredicted RBP10.25□□□□□ -0.77
TPM4-207ENST00000588032 FAM186AA6NE01 2351 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 GPR179Q6PRD1 2367 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 SOWAHDA6NJG2 315 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 BTNL10A8MVZ5 291 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 LATO43561 262 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 AP1G1O43747 822 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 SPOPO43791 374 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 GDF9O60383 454 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 MAFKO60675 156 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 RNGTTO60942 597 aaKnown RBP10.25□□□□□ -0.77
TPM4-207ENST00000588032 ADRB3P13945 408 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 ENGP17813 658 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 GJC1P36383 396 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 HSPA9P38646 679 aaKnown RBP10.25□□□□□ -0.77
TPM4-207ENST00000588032 MAPK8P45983 427 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 GRIA4P48058 902 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 METAP1P53582 386 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 GSDMDP57764 484 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 POM121L1PQ3SYA9 428 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 SLC45A4Q5BKX6 768 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 PIP5KL1Q5T9C9 394 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 GDPD4Q6W3E5 623 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 ZCCHC9Q8N567 271 aaKnown RBP10.25□□□□□ -0.77
TPM4-207ENST00000588032 ATPAF2Q8N5M1 289 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 PCDH19Q8TAB3 1148 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 FAF2Q96CS3 445 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 FEM1CQ96JP0 617 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 PSKH2Q96QS6 385 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 CINPQ9BW66 212 aaPredicted RBP10.25□□□□□ -0.77
TPM4-207ENST00000588032 MAK16Q9BXY0 300 aaKnown RBP10.25□□□□□ -0.77
TPM4-207ENST00000588032 RXFP3Q9NSD7 469 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 ETNK2Q9NVF9 386 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 HAUS2Q9NVX0 235 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 DKK3Q9UBP4 350 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 LHX3Q9UBR4 397 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 SEPT3Q9UH03 358 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.25□□□□□ -0.77
TPM4-207ENST00000588032 ALG6Q9Y672 507 aa10.25□□□□□ -0.77
TPM4-207ENST00000588032 LRRD1A4D1F6 860 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 C16orf96A6NNT2 1141 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 PLK4O00444 970 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 CDX4O14627 284 aaPredicted RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 PSTPIP1O43586 416 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 TSPAN6O43657 245 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 DFNA5O60443 496 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 BUB1BO60566 1050 aaPredicted RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 MAGEC1O60732 1142 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 CD48P09326 243 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 ZFXP17010 805 aaPredicted RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 MX2P20592 715 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 COMTP21964 271 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 CCNCP24863 283 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 TAS2R38P59533 333 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 GALNT2Q10471 571 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 OVGP1Q12889 678 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 HNRNPDQ14103 355 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms