RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 SUSD6Q92537 303 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 STAMBPL1Q96FJ0 436 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 ASIC4Q96FT7 647 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 CFAP36Q96G28 342 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 OXNAD1Q96HP4 312 aaPredicted RBP8.65□□□□□ -1.02
NPC1-204ENST00000586718 LRCH3Q96II8 777 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 FEM1CQ96JP0 617 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 ZFYVE19Q96K21 471 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 EXOC2Q96KP1 924 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 C9orf72Q96LT7 481 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 PWWP2AQ96N64 755 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 NUDCD1Q96RS6 583 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 TRMT61BQ9BVS5 477 aaKnown RBP8.65□□□□□ -1.02
NPC1-204ENST00000586718 FUT8Q9BYC5 575 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 TXLNGYQ9BZA5 131 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 CIPCQ9C0C6 399 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 CEP44Q9C0F1 390 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 IL22Q9GZX6 179 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 EBF3Q9H4W6 596 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 BRD9Q9H8M2 597 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 ECT2Q9H8V3 914 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 PPCSQ9HAB8 311 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 ZNF446Q9NWS9 450 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 UBP1Q9NZI7 540 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 DEC1Q9P2X7 70 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 ZC3H7BQ9UGR2 993 aaKnown RBP8.65□□□□□ -1.02
NPC1-204ENST00000586718 FAM50BQ9Y247 325 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 PLAAQ9Y263 795 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 SLC27A6Q9Y2P4 619 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 MAD1L1Q9Y6D9 718 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 REV3LO60673 3130 aa8.65□□□□□ -1.02
NPC1-204ENST00000586718 ANKRD36A6QL64 1941 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 TICRRQ7Z2Z1 1910 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 EXOC1LA0A1B0GW35 172 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 SDR42E2A6NKP2 422 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 MAP2K7O14733 419 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 ALOX15BO15296 676 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 INSIG1O15503 277 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 USP12O75317 370 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 TULP3O75386 442 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 MT-CYBP00156 380 aaPredicted RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 GSRP00390 522 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 FGF1P05230 155 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 SRPRAP08240 638 aaKnown RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 PGAM1P18669 254 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 MGAT1P26572 445 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 EIF2DP41214 584 aaKnown RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 ELK3P41970 407 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 MAGEA3P43357 314 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 RECQLP46063 649 aaPredicted RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 NPY2RP49146 381 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 SCNN1BP51168 640 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 WNT3AP56704 352 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 SNRPD1P62314 119 aaKnown RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 SKOR1P84550 965 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 ECT2LQ008S8 904 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 KDSRQ06136 332 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 RAD51Q06609 339 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 CBLBQ13191 982 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 HTR4Q13639 388 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 LAMB3Q13751 1172 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 RUNX3Q13761 415 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 SPARCL1Q14515 664 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 STAT4Q14765 748 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 FASTKD3Q14CZ7 662 aaKnown RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 UAP1Q16222 522 aaPredicted RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 KYNUQ16719 465 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 ITPRIPL2Q3MIP1 535 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 KRT71Q3SY84 523 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 FNBP1LQ5T0N5 605 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 MBLAC2Q68D91 279 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 KCTD11Q693B1 232 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 POTEHQ6S545 545 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 KDELC1Q6UW63 502 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 CAPN12Q6ZSI9 719 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 CAND1Q86VP6 1230 aaKnown RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 APCDD1Q8J025 514 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 PLCD3Q8N3E9 789 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 PGBD5Q8N414 524 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 RYBPQ8N488 228 aaPredicted RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 PCDH20Q8N6Y1 951 aaKnown RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 NAT16Q8N8M0 369 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 OR52K1Q8NGK4 314 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 PTCD2Q8WV60 388 aaKnown RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 ALG14Q96F25 216 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 ZNF419Q96HQ0 510 aaPredicted RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 LRRC3BQ96PB8 259 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 ZIM3Q96PE6 472 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 FAM83CQ9BQN1 747 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 GORASP1Q9BQQ3 440 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 TM6SF2Q9BZW4 377 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 STMN4Q9H169 189 aaPredicted RBP8.64□□□□□ -1.03
NPC1-204ENST00000586718 SEMA4AQ9H3S1 761 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 ATP13A3Q9H7F0 1226 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 MED4Q9NPJ6 270 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 CASS4Q9NQ75 786 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 HPS4Q9NQG7 708 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 LHX3Q9UBR4 397 aa8.64□□□□□ -1.03
NPC1-204ENST00000586718 CLEC4EQ9ULY5 219 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms