RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 LENG8Q96PV6 779 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 BOCQ9BWV1 1114 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 RAB6CQ9H0N0 254 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 ABCG4Q9H172 646 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 APEX2Q9UBZ4 518 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 SALL4Q9UJQ4 1053 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 PCDHGA8Q9Y5G5 932 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 ILVBLA1L0T0 632 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 FOXN3O00409 490 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CELA2BP08218 269 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-225ENST00000586385 JUNDP17535 347 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 OR1E1P30953 314 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 FLT3P36888 993 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 ACVRL1P37023 503 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 RABIFP47224 123 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 SULT1E1P49888 294 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 RNASE9P60153 205 aaKnown RBP12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CCDC15Q0P6D6 951 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CLN3Q13286 438 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CARD16Q5EG05 197 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 NYAP1Q6ZVC0 841 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CLEC14AQ86T13 490 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 PCDH20Q8N6Y1 951 aaKnown RBP12.1□□□□□ -0.47
BRCA1-225ENST00000586385 OR6K2Q8NGY2 324 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 LMX1AQ8TE12 382 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CENPTQ96BT3 561 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 PPP1R16AQ96I34 528 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 FEM1CQ96JP0 617 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 HEPHQ9BQS7 1158 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 SPON2Q9BUD6 331 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 LRRC61Q9BV99 259 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CEP44Q9C0F1 390 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 CLPBQ9H078 707 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 RRN3Q9NYV6 651 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 NEU3Q9UQ49 428 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 TRPM6Q9BX84 2022 aa12.1□□□□□ -0.47
BRCA1-225ENST00000586385 GOLGA6L4A6NEF3 574 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 CAPN8A6NHC0 703 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 C16orf96A6NNT2 1141 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 NTN3O00634 580 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-225ENST00000586385 TPP1O14773 563 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 AREL1O15033 823 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 MUSKO15146 869 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 CDH5P33151 784 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-225ENST00000586385 IGFALSP35858 605 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 GABRB2P47870 512 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 GNA12Q03113 381 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 DEUP1Q05D60 604 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 C1orf61Q13536 156 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 SLC25A52Q3SY17 297 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 ZNF783Q6ZMS7 281 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 RBM44Q6ZP01 1051 aaKnown RBP12.09□□□□□ -0.47
BRCA1-225ENST00000586385 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 XYLT1Q86Y38 959 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 FAM71AQ8IYT1 594 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 EXD3Q8N9H8 876 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 ASB12Q8WXK4 309 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 GRAMD1AQ96CP6 724 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 MED8Q96G25 268 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 MAGEB5Q9BZ81 275 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 TM6SF2Q9BZW4 377 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 ATP13A1Q9HD20 1204 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
BRCA1-225ENST00000586385 RP1P56715 2156 aa12.09□□□□□ -0.47
BRCA1-225ENST00000586385 HECTD1Q9ULT8 2610 aa12.08□□□□□ -0.47
BRCA1-225ENST00000586385 GTPBP10A4D1E9 387 aaKnown RBP12.08□□□□□ -0.48
BRCA1-225ENST00000586385 H3BM21 787 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 FPGTO14772 594 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 SRGAP2O75044 1071 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 TCEA3O75764 348 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 TNFSF15O95150 251 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 ITIH2P19823 946 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 RBMS1P29558 406 aaKnown RBP12.08□□□□□ -0.48
BRCA1-225ENST00000586385 SCNN1AP37088 669 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 RECQLP46063 649 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-225ENST00000586385 DNA2P51530 1060 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
BRCA1-225ENST00000586385 PTK2Q05397 1052 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 SLC20A2Q08357 652 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 SRSF6Q13247 344 aaKnown RBP12.08□□□□□ -0.48
BRCA1-225ENST00000586385 NR0B2Q15466 257 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 EXOC3L4Q17RC7 722 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 ARL13BQ3SXY8 428 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 PRRT3Q5FWE3 981 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 LRRC73Q5JTD7 316 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 MANEALQ5VSG8 457 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 RETSATQ6NUM9 610 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 LRRC31Q6UY01 552 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 GBP6Q6ZN66 633 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 NLRP14Q86W24 1093 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 FAM131BQ86XD5 332 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 ZDHHC17Q8IUH5 632 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 DRC7Q8IY82 874 aa12.08□□□□□ -0.48
BRCA1-225ENST00000586385 FAM81BQ96LP2 452 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms