RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 STAP1Q9ULZ2 295 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
LIG3-207ENST00000586119 KALRNO60229 2985 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 SPTY2D1-AS1A0A0U1RR47 76 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 TEX51A0A1B0GUA7 166 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 GTPBP10A4D1E9 387 aaKnown RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 A6NNZ2 444 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 FAM72CH0Y354 149 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 KLK10O43240 276 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 GCATO75600 419 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 F9P00740 461 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 MMEP08473 750 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 CYP11B1P15538 503 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 ITGB7P26010 798 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 CDH5P33151 784 aaPredicted RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 LSSP48449 732 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 CLCN6P51797 869 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 RPS21P63220 83 aaKnown RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 ATP11AP98196 1134 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 GNA12Q03113 381 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 CFHR1Q03591 330 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 RAPGEF1Q13905 1077 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 PDE1CQ14123 709 aaPredicted RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 ISXQ2M1V0 245 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 C15orf59Q2T9L4 293 aaPredicted RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 C3orf38Q5JPI3 329 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 MIIPQ5JXC2 388 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 CCDC183Q5T5S1 534 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 FAM72AQ5TYM5 149 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 FAM72DQ6L9T8 149 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 EFL1Q7Z2Z2 1120 aaKnown RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 ZNF605Q86T29 641 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 FAM72BQ86X60 149 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 RYBPQ8N488 228 aaPredicted RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 FAM181AQ8N9Y4 354 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 TMEM35BQ8NCS4 154 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 ZNF248Q8NDW4 579 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 ATXN7L3BQ96GX2 97 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 PRR11Q96HE9 360 aaPredicted RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 ZNF578Q96N58 590 aaPredicted RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 DEPDC7Q96QD5 511 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 C1QTNF2Q9BXJ5 285 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 POLR1BQ9H9Y6 1135 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 RRN3Q9NYV6 651 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 IPO11Q9UI26 975 aaKnown RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 DNAI1Q9UI46 699 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 SATB2Q9UPW6 733 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 ATMQ13315 3056 aa11.83□□□□□ -0.52
LIG3-207ENST00000586119 SETXQ7Z333 2677 aaKnown RBP11.83□□□□□ -0.52
LIG3-207ENST00000586119 UNC13CQ8NB66 2214 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 NEMP2A6NFY4 417 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 C16orf96A6NNT2 1141 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 CELA2BP08218 269 aaPredicted RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 ALPPL2P10696 532 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 NME1P15531 152 aaKnown RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 JUNDP17535 347 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 PCBP4P57723 403 aaKnown RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 SNX16P57768 344 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 PFN3P60673 137 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 HNRNPKP61978 463 aaKnown RBP eCLIP11.82□□□□□ -0.52
LIG3-207ENST00000586119 CCDC15Q0P6D6 951 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 MTA1Q13330 715 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 LY6DQ14210 128 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 TCEA2Q15560 299 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 CDO1Q16878 200 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 VWA3BQ502W6 1294 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 ATXN7L2Q5T6C5 722 aaPredicted RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 KLHDC7AQ5VTJ3 777 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 NAA35Q5VZE5 725 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 RETSATQ6NUM9 610 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 FOXR1Q6PIV2 292 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 KYAT3Q6YP21 454 aaKnown RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 RBM43Q6ZSC3 357 aaKnown RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 ZDHHC17Q8IUH5 632 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 PCDH20Q8N6Y1 951 aaKnown RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 JOSD2Q8TAC2 188 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 IFT43Q96FT9 208 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 VCPIP1Q96JH7 1222 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 HAPLN3Q96S86 360 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 ZYG11BQ9C0D3 744 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 MBNL1Q9NR56 388 aaKnown RBP11.82□□□□□ -0.52
LIG3-207ENST00000586119 ENTPD2Q9Y5L3 495 aa11.82□□□□□ -0.52
LIG3-207ENST00000586119 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 ZNF462Q96JM2 2506 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 EME2A4GXA9 379 aaPredicted RBP11.81□□□□□ -0.52
LIG3-207ENST00000586119 CYSRT1A8MQ03 144 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 FPGTO14772 594 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 MUSKO15146 869 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 AQP9O43315 295 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 MMP20O60882 483 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 DXOO77932 396 aaKnown RBP11.81□□□□□ -0.52
LIG3-207ENST00000586119 UGT2B4P06133 528 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 GP1BAP07359 652 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 RABIFP47224 123 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 ADKP55263 362 aaKnown RBP11.81□□□□□ -0.52
LIG3-207ENST00000586119 SLC20A2Q08357 652 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 SGCGQ13326 291 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 NFKBIBQ15653 356 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 MAN2A1Q16706 1144 aa11.81□□□□□ -0.52
LIG3-207ENST00000586119 CCDC14Q49A88 953 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms