RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CTAGE4Q8IX94 777 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 CCDC89Q8N998 374 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 GLIS1Q8NBF1 620 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 OR2A12Q8NGT7 310 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 GDAP1L1Q96MZ0 367 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 NUDCD1Q96RS6 583 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 CARD6Q9BX69 1037 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 GLOD4Q9HC38 313 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 HECAQ9UBI9 543 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 MMP17Q9ULZ9 603 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 NEU2Q9Y3R4 380 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 TTLL3Q9Y4R7 772 aa16.13■□□□□ 0.17
CSNK1D-212ENST00000580061 TTC24A2A3L6 582 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 BNIP3LO60238 219 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 GJB3O75712 270 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 ECEL1O95672 775 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 ZSCAN5DPP0CG00 497 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 HOXB2P14652 356 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 NFKB1P19838 968 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 RECQLP46063 649 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 RPS9P46781 194 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 CCNHP51946 323 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 DSC2Q02487 901 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 ITKQ08881 620 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 CAMK2GQ13555 558 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 DHX34Q14147 1143 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 KCTD19Q17RG1 926 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 ITPRIPL1Q6GPH6 555 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 DPY19L3Q6ZPD9 716 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 SRLQ86TD4 932 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 VOPP1Q96AW1 172 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 SEMA3CQ99985 751 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 SLC25A51Q9H1U9 297 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 GBA3Q9H227 469 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 CHRDQ9H2X0 955 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 PCDH9Q9HC56 1237 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 PRSS16Q9NQE7 514 aa16.12■□□□□ 0.17
CSNK1D-212ENST00000580061 A0A1W2PQF6 199 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 INSIG1O15503 277 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 SYNCRIPO60506 623 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 ATG13O75143 517 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 METTL18O95568 372 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 GAS8O95995 478 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 KRT14P02533 472 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 DCNP07585 359 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 COL9A1P20849 921 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 CES1P23141 567 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 RPL22P35268 128 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 ACTN2P35609 894 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 SCNN1BP51168 640 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 DR1Q01658 176 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 NIPAL4Q0D2K0 466 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 ELAVL3Q14576 367 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 MYLK3Q32MK0 819 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 RALGPS1Q5JS13 557 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 NCEH1Q6PIU2 408 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 ARHGEF18Q6ZSZ5 1173 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 SYT13Q7L8C5 426 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 RYBPQ8N488 228 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 CHST14Q8NCH0 376 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 OR6K2Q8NGY2 324 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 IMP4Q96G21 291 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 NSMCE3Q96MG7 304 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 FCRL5Q96RD9 977 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 NOD2Q9HC29 1040 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 CD248Q9HCU0 757 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 SCUBE2Q9NQ36 999 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 PAK5Q9P286 719 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 RSPH14Q9UHP6 348 aa16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 EVLQ9UI08 416 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-212ENST00000580061 ALOX15BO15296 676 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 TTI1O43156 1089 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 POP4O95707 220 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 MMP2P08253 660 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 AOC1P19801 751 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 PSMB4P28070 264 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 GKP32189 559 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 MAGEA9P43362 315 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 MAPK8P45983 427 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 AP1S1P61966 158 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 IHHQ14623 411 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 STARD3Q14849 445 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 PPP1R7Q15435 360 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 CRY1Q16526 586 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 PARP6Q2NL67 630 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 KIAA1211LQ6NV74 962 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 TMEM92Q6UXU6 159 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 C4orf22Q6V702 233 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 SYDE1Q6ZW31 735 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 MAATS1Q7Z4T9 603 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 PRPF39Q86UA1 669 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 JAMLQ86YT9 394 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 STK40Q8N2I9 435 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 MMGT1Q8N4V1 131 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 OR8D1Q8WZ84 308 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 FAM129BQ96TA1 746 aa16.1■□□□□ 0.17
CSNK1D-212ENST00000580061 GORASP1Q9BQQ3 440 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms