RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ITGB2P05107 769 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 ANXA6P08133 673 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 WT1P19544 449 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 CCL7P80098 99 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 GCNT1Q02742 428 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 PDCLQ13371 301 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 CARD16Q5EG05 197 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 FAXCQ5TGI0 409 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 ZNF658Q5TYW1 1059 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 ESRP1Q6NXG1 681 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 XKR5Q6UX68 686 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 PARS2Q7L3T8 475 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 TFAP2DQ7Z6R9 452 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 VASH2Q86V25 355 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 ZFAND4Q86XD8 727 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 ZNF683Q8IZ20 524 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 PHACTR4Q8IZ21 702 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 WDR48Q8TAF3 677 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 BTN2A2Q8WVV5 523 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 NAT6Q93015 286 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 LIN37Q96GY3 246 aaPredicted RBP10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 CPXM1Q96SM3 734 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 HEPHQ9BQS7 1158 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 LRRC61Q9BV99 259 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 TKTL2Q9H0I9 626 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 TMPRSS4Q9NRS4 437 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 SIRPGQ9P1W8 387 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 ANKMY1Q9P2S6 941 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 PISDQ9UG56 409 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 ITM2BQ9Y287 266 aa10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 FCF1Q9Y324 198 aaKnown RBP10.3□□□□□ -0.76
NPLOC4-220ENST00000576940 A0A1W2PQM1 296 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 DRGXA6NNA5 263 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 C16orf96A6NNT2 1141 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 MED7O43513 233 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 AP1G1O43747 822 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 ZMPSTE24O75844 475 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 HSP90AA1P07900 732 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 GLI1P08151 1106 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 TFE3P19532 575 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 ITIH2P19823 946 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 ITIH1P19827 911 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 ITGB7P26010 798 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 GNA15P30679 374 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 ABL2P42684 1182 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 CLCN6P51797 869 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 CCNHP51946 323 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 THOP1P52888 689 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 INHBCP55103 352 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 TLE1Q04724 770 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 CETN1Q12798 172 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 UBAP2LQ14157 1087 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 PTK2BQ14289 1009 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 CLCA4Q14CN2 919 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 CCDC40Q4G0X9 1142 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 EFHC1Q5JVL4 640 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 MANEAQ5SRI9 462 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 ISM2Q6H9L7 571 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 FAM183BPQ6ZVS7 135 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 SETD3Q86TU7 594 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 VPS36Q86VN1 386 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 PTRH1Q86Y79 214 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 SDR16C5Q8N3Y7 309 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 DCAF4L2Q8NA75 395 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 OR6K2Q8NGY2 324 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 SNX21Q969T3 373 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 CCDC74AQ96AQ1 378 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 CENPTQ96BT3 561 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 GFM1Q96RP9 751 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 SEMA3CQ99985 751 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 SLC13A1Q9BZW2 595 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 WDCPQ9H6R7 721 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 UBE2TQ9NPD8 197 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 MBNL1Q9NR56 388 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 PIGVQ9NUD9 493 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 HECAQ9UBI9 543 aaPredicted RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 ZDHHC9Q9Y397 364 aa10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 TLN1Q9Y490 2541 aaKnown RBP10.29□□□□□ -0.76
NPLOC4-220ENST00000576940 PRAMEF33A0A0G2JMD5 474 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 A0A1W2PQ27 194 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 A0A1W2PQ64 194 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 NEMP1O14524 444 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 P4HA2O15460 535 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 TSPAN6O43657 245 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 PRAMEF10O60809 474 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 MMP20O60882 483 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 HSF2BPO75031 334 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 SRGAP2O75044 1071 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 CD160O95971 181 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 RPLP0P05388 317 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 JMJD7P0C870 316 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 LIPCP11150 499 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 OR1E1P30953 314 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 NOS2P35228 1153 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 EIF4A3P38919 411 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 ETV5P41161 510 aa10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 SERPINH1P50454 418 aaKnown RBP10.28□□□□□ -0.76
NPLOC4-220ENST00000576940 RNASE9P60153 205 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms