RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PALMDQ9NP74 551 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 MRPL40Q9NQ50 206 aaKnown RBP14.58□□□□□ -0.07
SMG6-215ENST00000574501 GGA3Q9NZ52 723 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.07
SMG6-215ENST00000574501 HESX1Q9UBX0 185 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 RUVBL2Q9Y230 463 aaKnown RBP14.58□□□□□ -0.07
SMG6-215ENST00000574501 SLC30A1Q9Y6M5 507 aa14.58□□□□□ -0.07
SMG6-215ENST00000574501 TRIM64A6NGJ6 449 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 RNF103O00237 685 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 IL18RAPO95256 599 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 APBA3O96018 575 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 HSPA1AP0DMV8 641 aaKnown RBP14.58□□□□□ -0.08
SMG6-215ENST00000574501 HSPA1BP0DMV9 641 aaKnown RBP14.58□□□□□ -0.08
SMG6-215ENST00000574501 YBX3P16989 372 aaKnown RBP eCLIP14.58□□□□□ -0.08
SMG6-215ENST00000574501 STX5Q13190 355 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 FASTKQ14296 549 aaKnown RBP14.58□□□□□ -0.08
SMG6-215ENST00000574501 PPP1R3AQ16821 1122 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 DEPDC1Q5TB30 811 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 SPPL2CQ8IUH8 684 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 PYROXD2Q8N2H3 581 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 C12orf29Q8N999 325 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 KDM1BQ8NB78 822 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 PCYOX1LQ8NBM8 494 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 OR9I1Q8NGQ6 314 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 OR2T34Q8NGX1 318 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 OR2T3Q8NH03 318 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 KCTD4Q8WVF5 259 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 ANKRD36BP1Q96IX9 119 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 C1orf50Q9BV19 199 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 HERC2P3Q9BVR0 1158 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 GTSE1Q9NYZ3 720 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 EGFL7Q9UHF1 273 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 OAZ3Q9UMX2 235 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 SLC27A5Q9Y2P5 690 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 CPQQ9Y646 472 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 FER1L6Q2WGJ9 1857 aa14.58□□□□□ -0.08
SMG6-215ENST00000574501 TRIM64BA6NI03 449 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 A8MU76 341 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 HNRNPLP14866 589 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMG6-215ENST00000574501 NR4A1P22736 598 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 CCND2P30279 289 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 IDUAP35475 653 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 KCNJ8Q15842 424 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 SPANXN3Q5MJ09 141 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 NCBP2-AS2Q69YL0 99 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 ABRAXAS1Q6UWZ7 409 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 TERB1Q8NA31 727 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMG6-215ENST00000574501 SLC7A14Q8TBB6 771 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 DUS3LQ96G46 650 aaKnown RBP14.57□□□□□ -0.08
SMG6-215ENST00000574501 NAT9Q9BTE0 207 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 IL1RL2Q9HB29 575 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 FANCEQ9HB96 536 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 SIX4Q9UIU6 781 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
SMG6-215ENST00000574501 AP4E1Q9UPM8 1137 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 TCAF1Q9Y4C2 921 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 SNX9Q9Y5X1 595 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 DGKBQ9Y6T7 804 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 LRRC37AA6NMS7 1700 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 SLCO1B7G3V0H7 640 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 KPNA4O00629 521 aaPredicted RBP14.57□□□□□ -0.08
SMG6-215ENST00000574501 MRASO14807 208 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 OGTO15294 1046 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 NDUFB5O43674 189 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 DLX3O60479 287 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 CLPXO76031 633 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 MT-CO1P00395 513 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 GOT1P17174 413 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 EEF1B2P24534 225 aaKnown RBP14.57□□□□□ -0.08
SMG6-215ENST00000574501 BFSP2Q13515 415 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 ZNF460Q14592 562 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 GRM3Q14832 879 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 ZNF618Q5T7W0 954 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 MFSD4BQ5TF39 518 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 PIGZQ86VD9 579 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 SPNS2Q8IVW8 549 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 TMEM192Q8IY95 271 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 SHCBP1Q8NEM2 672 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 LRCH3Q96II8 777 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 VPS39Q96JC1 886 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 CSPG4P5Q96PW8 444 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 ALPK1Q96QP1 1244 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 KCTD15Q96SI1 283 aaPredicted RBP14.57□□□□□ -0.08
SMG6-215ENST00000574501 TDRD1Q9BXT4 1180 aaKnown RBP14.57□□□□□ -0.08
SMG6-215ENST00000574501 B3GNT5Q9BYG0 378 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 BCO2Q9BYV7 579 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 TANC1Q9C0D5 1861 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 IARS2Q9NSE4 1012 aaKnown RBP14.57□□□□□ -0.08
SMG6-215ENST00000574501 TMEM181Q9P2C4 612 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 NRXN2Q9P2S2 1712 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 CROTQ9UKG9 612 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 TLK1Q9UKI8 766 aa14.57□□□□□ -0.08
SMG6-215ENST00000574501 EI24O14681 340 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 MDM4O15151 490 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 CILPO75339 1184 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 LRPAP1P30533 357 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 OPRL1P41146 370 aa14.56□□□□□ -0.08
SMG6-215ENST00000574501 CSE1LP55060 971 aaKnown RBP14.56□□□□□ -0.08
SMG6-215ENST00000574501 OXA1LQ15070 435 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms