RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SDHDO14521 159 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 MMP3P08254 477 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 ARSAP15289 507 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 KCNE1P15382 129 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 INTS6LQ5JSJ4 861 aaKnown RBP19.31■□□□□ 0.68
SCARF1-206ENST00000573852 IL23RQ5VWK5 629 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 NAPEPLDQ6IQ20 393 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 ARRDC4Q8NCT1 418 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 TMEM40Q8WWA1 233 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 SGF29Q96ES7 293 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 VAT1Q99536 393 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 TMEM30AQ9NV96 361 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 PLK2Q9NYY3 685 aa19.31■□□□□ 0.68
SCARF1-206ENST00000573852 CCDC160A6NGH7 325 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 KCNU1A8MYU2 1149 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 USP17L7P0C7H9 530 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 COL6A2P12110 1019 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 SH3BGRP55822 239 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-206ENST00000573852 RAB10P61026 200 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 PTK2BQ14289 1009 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 POU6F1Q14863 301 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 SH2D4BQ5SQS7 431 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 TOP6BLQ8N6T0 577 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 TXNDC5Q8NBS9 432 aaKnown RBP19.3■□□□□ 0.68
SCARF1-206ENST00000573852 ATP6V1E2Q96A05 226 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 ZFRQ96KR1 1074 aaKnown RBP19.3■□□□□ 0.68
SCARF1-206ENST00000573852 COLEC11Q9BWP8 271 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 ATXN10Q9UBB4 475 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 OR12D3Q9UGF7 316 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-206ENST00000573852 FAM58BPP0C7Q3 252 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 FAM200BP0CF97 657 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 SMPD1P17405 629 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 XKR4Q5GH76 650 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 PKN3Q6P5Z2 889 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 B3GNT6Q6ZMB0 384 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 LCA5Q86VQ0 697 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 ANKRD13AQ8IZ07 590 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 PCDH20Q8N6Y1 951 aaKnown RBP19.3■□□□□ 0.68
SCARF1-206ENST00000573852 MAELQ96JY0 434 aaKnown RBP19.3■□□□□ 0.68
SCARF1-206ENST00000573852 CRTAC1Q9NQ79 661 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 ADA2Q9NZK5 511 aa19.3■□□□□ 0.68
SCARF1-206ENST00000573852 FAM95CA0A1B0GW59 222 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 TRIM38O00635 465 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 LRIG2O94898 1065 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 ZNF26P17031 533 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 BAG6P46379 1132 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 APOFQ13790 326 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 PRPSAP1Q14558 356 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 ESRP1Q6NXG1 681 aaKnown RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 CNSTQ6PJW8 725 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 DRAXINQ8NBI3 349 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 SHCBP1Q8NEM2 672 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 EDEM1Q92611 657 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 DCPSQ96C86 337 aaKnown RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 SMOQ99835 787 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 SLC2A11Q9BYW1 496 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 SENP6Q9GZR1 1112 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 CACNG4Q9UBN1 327 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 PCDHGA7Q9Y5G6 932 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 A0A1B0GTW7 788 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 NEMP2A6NFY4 417 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 C9IYK1 514 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 XPOTO43592 962 aaKnown RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 MT-CYBP00156 380 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 HNRNPLP14866 589 aaKnown RBP eCLIP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 ARNTP27540 789 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 GJA9P57773 515 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 DGKDQ16760 1214 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 EML3Q32P44 896 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 MGAT5BQ3V5L5 792 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 UBXN11Q5T124 520 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 ARHGAP36Q6ZRI8 547 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 PTAR1Q7Z6K3 402 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-206ENST00000573852 HMGCLL1Q8TB92 370 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 TKTL2Q9H0I9 626 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 PCDHAC1Q9H158 963 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 OSBPL2Q9H1P3 480 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 FIS1Q9Y3D6 152 aa19.29■□□□□ 0.68
SCARF1-206ENST00000573852 HSPA1AP0DMV8 641 aaKnown RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 HSPA1BP0DMV9 641 aaKnown RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 STMN1P16949 149 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 PSME3P61289 254 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 PPIL2Q13356 520 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 USP41Q3LFD5 358 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 ARL13BQ3SXY8 428 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 LRRC23Q53EV4 343 aaPredicted RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 PCID2Q5JVF3 399 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 ZNF280DQ6N043 979 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 CNTN4Q8IWV2 1026 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 PELI3Q8N2H9 469 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 CEP70Q8NHQ1 597 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 GTSE1Q9NYZ3 720 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 SLC2A6Q9UGQ3 507 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 NPHS1O60500 1241 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 CAPN15O75808 1086 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 ARCN1P48444 511 aaKnown RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 HSPA13P48723 471 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 INHBCP55103 352 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 NRF1Q16656 503 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms