RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 DLL3Q9NYJ7 618 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-213ENST00000573577 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
RPAIN-213ENST00000573577 NCKAP1Q9Y2A7 1128 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 CAPN6Q9Y6Q1 641 aa13.77□□□□□ -0.21
RPAIN-213ENST00000573577 CEP250Q9BV73 2442 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 CHD5Q8TDI0 1954 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
RPAIN-213ENST00000573577 LNP1A1A4G5 178 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 K7ERQ8 282 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 MCF2LO15068 1137 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SMAD6O43541 496 aaKnown RBP13.76□□□□□ -0.21
RPAIN-213ENST00000573577 MFSD11O43934 449 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 BNIP3LO60238 219 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 FTCDO95954 541 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 IL1BP01584 269 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 C5AR1P21730 350 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SLC8A1P32418 973 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 CDKN2BP42772 138 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 DNA2P51530 1060 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SNRPD1P62314 119 aaKnown RBP13.76□□□□□ -0.21
RPAIN-213ENST00000573577 PUM1Q14671 1186 aaKnown RBP eCLIP13.76□□□□□ -0.21
RPAIN-213ENST00000573577 PPP2R5EQ16537 467 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 TRIM61Q5EBN2 209 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 FAM46CQ5VWP2 391 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SLC9A4Q6AI14 798 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SPOCD1Q6ZMY3 1216 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 RABEPKQ7Z6M1 372 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 RGL4Q8IZJ4 473 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 BBS5Q8N3I7 341 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 PQLC3Q8N755 202 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 CEP76Q8TAP6 659 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 GANCQ8TET4 914 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 ZNF599Q96NL3 588 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 EDEM2Q9BV94 578 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 KCNF1Q9H3M0 494 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SGK2Q9HBY8 427 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SERGEFQ9UGK8 458 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 FZD4Q9ULV1 537 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 FCF1Q9Y324 198 aaKnown RBP13.76□□□□□ -0.21
RPAIN-213ENST00000573577 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 SPTBN4Q9H254 2564 aa13.76□□□□□ -0.21
RPAIN-213ENST00000573577 DCHS1Q96JQ0 3298 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 RALGAPA1Q6GYQ0 2036 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 NUP205Q92621 2012 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 A0A1W2PP55 124 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 METTL12A8MUP2 240 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 C1QTNF3-AMACRE9PGA6 284 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 J3KR12 359 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 RNASEH2AO75792 299 aaKnown RBP13.75□□□□□ -0.21
RPAIN-213ENST00000573577 TMCC1O94876 653 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 SEMA4FO95754 770 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 CD160O95971 181 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 GSRP00390 522 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 PRNPP04156 253 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 CFIP05156 583 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 TGM2P21980 687 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 GARSP41250 739 aaKnown RBP13.75□□□□□ -0.21
RPAIN-213ENST00000573577 MARCKSL1P49006 195 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 NR2C2P49116 596 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 LIMK1P53667 647 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 RHOAP61586 193 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 IRX4P78413 519 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 RAD51Q06609 339 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 GALNT2Q10471 571 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 TAZQ16635 292 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 DUOXA1Q1HG43 343 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 CARD16Q5EG05 197 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 DCAF12L1Q5VU92 463 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 TIGD7Q6NT04 549 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-213ENST00000573577 SLC23A3Q6PIS1 610 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 LEKR1Q6ZMV7 388 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 OR2A12Q8NGT7 310 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 DNASE2BQ8WZ79 361 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 GDAP1L1Q96MZ0 367 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 OMDQ99983 421 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 NUSAP1Q9BXS6 441 aaKnown RBP13.75□□□□□ -0.21
RPAIN-213ENST00000573577 C6orf106Q9H6K1 298 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-213ENST00000573577 PDFQ9HBH1 243 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 HAUS2Q9NVX0 235 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 SUSD2Q9UGT4 822 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 PPM1HQ9ULR3 514 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 EFR3BQ9Y2G0 817 aa13.75□□□□□ -0.21
RPAIN-213ENST00000573577 NYNRINQ9P2P1 1898 aaKnown RBP13.74□□□□□ -0.21
RPAIN-213ENST00000573577 LAMA1P25391 3075 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 hCG_1818297A0A087WSY0 165 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 SLC30A4O14863 429 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 PPP1R12AO14974 1030 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-213ENST00000573577 MAFKO60675 156 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 IGSF6O95976 241 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 SERPINF2P08697 491 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 GNSP15586 552 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 MAOBP27338 520 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 CHRNA3P32297 505 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 PTPN7P35236 360 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 HSPA9P38646 679 aaKnown RBP13.74□□□□□ -0.21
RPAIN-213ENST00000573577 PEX5P50542 639 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 RENBPP51606 427 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms