RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 OVGP1Q12889 678 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 GRAPQ13588 217 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 ARHGAP19Q14CB8 494 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 WDR43Q15061 677 aaKnown RBP eCLIP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 SGCBQ16585 318 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 ZNF569Q5MCW4 686 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 MFSD14BQ5SR56 506 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 ZNF468Q5VIY5 522 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 KRT79Q5XKE5 535 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 KCNV1Q6PIU1 500 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 Q6ZVL8 140 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 TRAPPC11Q7Z392 1133 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 COMTD1Q86VU5 262 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 TRIM48Q8IWZ4 208 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 FAM9CQ8IZT9 166 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 TTC5Q8N0Z6 440 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 ZGPATQ8N5A5 531 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 ZNF321PQ8N8H1 164 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 PTGR2Q8N8N7 351 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 MCUQ8NE86 351 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 SLC24A4Q8NFF2 622 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 TRIM58Q8NG06 486 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 CALML6Q8TD86 181 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 HDAC7Q8WUI4 952 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 CACTINQ8WUQ7 758 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 GLMPQ8WWB7 406 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 NCLNQ969V3 563 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 PTERQ96BW5 349 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 LRRC39Q96DD0 335 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 MASTLQ96GX5 879 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 FAM227BQ96M60 508 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 WDFY2Q96P53 400 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 USP28Q96RU2 1077 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 MPHOSPH9Q99550 1183 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 MTG1Q9BT17 334 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 TLR10Q9BXR5 811 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 RTN4RQ9BZR6 473 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 SLC25A32Q9H2D1 315 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 PNNQ9H307 717 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 GSX1Q9H4S2 264 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 TUFT1Q9NNX1 390 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 PALMDQ9NP74 551 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 DNAJC17Q9NVM6 304 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 WSB2Q9NYS7 404 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 CFAP97Q9P2B7 532 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 NCDNQ9UBB6 729 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 SSX2IPQ9Y2D8 614 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 COPG1Q9Y678 874 aaKnown RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 COMMD3-BMI1R4GMX3 469 aa5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 ZNF644Q9H582 1327 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-210ENST00000572787 C15orf38-AP3S2A0A0A6YYH1 394 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ZNF879B4DU55 563 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 H7C4K7 107 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 SOCS6O14544 535 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 MEIS2O14770 477 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 NRP1O14786 923 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 EIF3DO15371 548 aaKnown RBP eCLIP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 NVLO15381 856 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ZSCAN9O15535 394 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 SSX5O60225 188 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 CUTAO60888 179 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 AVILO75366 819 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 RHOBTB1O94844 696 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 KLHL18O94889 574 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ALBP02768 609 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 GBAP04062 536 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PCCBP05166 539 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 GALTP07902 379 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 SYPP08247 313 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 VIMP08670 466 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ABHD2P08910 425 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 HSPA8P11142 646 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ADH5P11766 374 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 CD19P15391 556 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 HNRNPA2B1P22626 353 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PTPN4P29074 926 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 HOXA13P31271 388 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 CD68P34810 354 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 KIR3DL1P43629 444 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 CLCNKBP51801 687 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 BLVRAP53004 296 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PNLIPRP2P54317 469 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PDE1AP54750 535 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ATP5IP56385 69 aaPredicted RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PCBP3P57721 371 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 NFATC3Q12968 1075 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 BNIP1Q12981 228 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 PPIGQ13427 754 aaKnown RBP eCLIP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 KCNC3Q14003 757 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 RAB3GAP1Q15042 981 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 TAZQ16635 292 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 MST1LQ2TV78 715 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 LRRC24Q50LG9 513 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 GLE1Q53GS7 698 aaKnown RBP5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ZNF789Q5FWF6 425 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 EMC4Q5J8M3 183 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 XP32Q5T750 250 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 FAM171A1Q5VUB5 890 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 ANKRD40Q6AI12 368 aa5.12□□□□□ -1.59
TOPBP1-210ENST00000572787 RAET1GQ6H3X3 334 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms