RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 LEFTY1O75610 366 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 PALMO75781 387 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 RHOBTB1O94844 696 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 GSRP00390 522 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 C5AR1P21730 350 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 CTNNA1P35221 906 aaKnown RBP16.06■□□□□ 0.16
CHD3-215ENST00000572750 DRD3P35462 400 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 DYNLT1P63172 113 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 IL10RBQ08334 325 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 LLGL1Q15334 1064 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 CYTH1Q15438 398 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 INO80DQ53TQ3 878 aaPredicted RBP16.06■□□□□ 0.16
CHD3-215ENST00000572750 SLC36A4Q6YBV0 504 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 KATNAL2Q8IYT4 538 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 HDDC3Q8N4P3 179 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 PLD5Q8N7P1 536 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.06■□□□□ 0.16
CHD3-215ENST00000572750 LRRN4Q8WUT4 740 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 CASKIN2Q8WXE0 1202 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 ANP32BQ92688 251 aaKnown RBP16.06■□□□□ 0.16
CHD3-215ENST00000572750 CALR3Q96L12 384 aaKnown RBP16.06■□□□□ 0.16
CHD3-215ENST00000572750 HSPA12BQ96MM6 686 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 GDAP1L1Q96MZ0 367 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 OMDQ99983 421 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 TSGA10Q9BZW7 698 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 HECAQ9UBI9 543 aaPredicted RBP16.06■□□□□ 0.16
CHD3-215ENST00000572750 SCML1Q9UN30 329 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
CHD3-215ENST00000572750 WASF2Q9Y6W5 498 aa16.06■□□□□ 0.16
CHD3-215ENST00000572750 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.05■□□□□ 0.16
CHD3-215ENST00000572750 ZNF487B1APH4 448 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 KRIT1O00522 736 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 APOL1O14791 398 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 NRDCO43847 1150 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 GDF9O60383 454 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 MAFKO60675 156 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 EPN2O95208 641 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 FTCDO95954 541 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 IGSF6O95976 241 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 PRNPP04156 253 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 CCDC175P0C221 793 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 OXTRP30559 389 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 CDKN2BP42772 138 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 SNRPD1P62314 119 aaKnown RBP16.05■□□□□ 0.16
CHD3-215ENST00000572750 GALNT2Q10471 571 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 CNTN1Q12860 1018 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 CCDC6Q16204 474 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 IFI16Q16666 785 aaKnown RBP16.05■□□□□ 0.16
CHD3-215ENST00000572750 ARSIQ5FYB1 569 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 FAM46CQ5VWP2 391 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 USP30Q70CQ3 517 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 VSIG1Q86XK7 387 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 SLC41A1Q8IVJ1 513 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 CCDC50Q8IVM0 306 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 KIAA1524Q8TCG1 905 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 ARRDC3Q96B67 414 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 HEPHQ9BQS7 1158 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 CINPQ9BW66 212 aaPredicted RBP16.05■□□□□ 0.16
CHD3-215ENST00000572750 BTBD1Q9H0C5 482 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 NCKAP1Q9Y2A7 1128 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHD3-215ENST00000572750 RALGAPA1Q6GYQ0 2036 aa16.05■□□□□ 0.16
CHD3-215ENST00000572750 FAM47DPA6NHR8 397 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 MUSKO15146 869 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 GJB3O75712 270 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 SEMA4FO95754 770 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 PEX11BO96011 259 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 PTMAP06454 111 aaKnown RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 KRT10P13645 584 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 GARSP41250 739 aaKnown RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 RGRP47804 291 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 ADPRHP54922 357 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 SHC2P98077 582 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 CREB5Q02930 508 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 SLC10A7Q0GE19 358 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 SLC10A2Q12908 348 aaPredicted RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 GSE1Q14687 1217 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 N4BP2L1Q5TBK1 243 aaPredicted RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 TMCO4Q5TGY1 634 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 AGBL4Q5VU57 503 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 LYSMD4Q5XG99 296 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 SLC9A4Q6AI14 798 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 CYP2U1Q7Z449 544 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 NT5DC3Q86UY8 548 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 TSEN2Q8NCE0 465 aaKnown RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 NETO1Q8TDF5 533 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 VOPP1Q96AW1 172 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 ZNF419Q96HQ0 510 aaPredicted RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 PDLIM2Q96JY6 352 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 MAK16Q9BXY0 300 aaKnown RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 ARRDC1-AS1Q9H2J1 176 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 KCNF1Q9H3M0 494 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 C6orf106Q9H6K1 298 aaPredicted RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 DTLQ9NZJ0 730 aa16.04■□□□□ 0.16
CHD3-215ENST00000572750 EVLQ9UI08 416 aaPredicted RBP16.04■□□□□ 0.16
CHD3-215ENST00000572750 FZD4Q9ULV1 537 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms