RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 ASXL3Q9C0F0 2248 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 TENM4Q6N022 2769 aa13.6□□□□□ -0.23
CCDC40-205ENST00000571028 ZNF462Q96JM2 2506 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 IGLV3-10A0A075B6K4 115 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 LRRD1A4D1F6 860 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 BTNL10A8MVZ5 291 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 H3BRJ5 948 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 KCNK3O14649 394 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 ENC1O14682 589 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 KRT86O43790 486 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 DFNA5O60443 496 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 RFPL3O75679 317 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 PALMO75781 387 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 IGLV3-19P01714 112 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 EPHX1P07099 455 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 KRT7P08729 469 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 CD48P09326 243 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 RHOQP17081 205 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 AMPD1P23109 780 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 SLC1A1P43005 524 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 DNA2P51530 1060 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 NRG1Q02297 640 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-205ENST00000571028 MMRN1Q13201 1228 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 C5orf22Q49AR2 442 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 MANEALQ5VSG8 457 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 TMEM215Q68D42 235 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
CCDC40-205ENST00000571028 SERPINA13PQ6UXR4 307 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 RFX8Q6ZV50 586 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 AHI1Q8N157 1196 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 ZNF557Q8N988 423 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-205ENST00000571028 OR7D4Q8NG98 312 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 C1orf216Q8TAB5 229 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 WFIKKN2Q8TEU8 576 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 TEKT4Q8WW24 435 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 RNF25Q96BH1 459 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-205ENST00000571028 TSGA10Q9BZW7 698 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 CLMPQ9H6B4 373 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 CATSPERBQ9H7T0 1116 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 PCDH18Q9HCL0 1135 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 NDFIP2Q9NV92 336 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 ELOVL2Q9NXB9 296 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 CWC15Q9P013 229 aaKnown RBP13.59□□□□□ -0.23
CCDC40-205ENST00000571028 THAP10Q9P2Z0 257 aaPredicted RBP13.59□□□□□ -0.23
CCDC40-205ENST00000571028 VPS28Q9UK41 221 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
CCDC40-205ENST00000571028 PPP2R2CQ9Y2T4 447 aa13.59□□□□□ -0.23
CCDC40-205ENST00000571028 A0A0D9SEW6 157 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 GRID2IPA4D2P6 1211 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 H0Y8X5 98 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 ERVH48-1M5A8F1 160 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 FSBPO95073 299 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 FTCDO95954 541 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 C1SP09871 688 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 ERCC2P18074 760 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 ACTN2P35609 894 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 CTSOP43234 321 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 HADHBP55084 474 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 TARDBPQ13148 414 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 LLGL1Q15334 1064 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 FNDC3BQ53EP0 1204 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 ARTNQ5T4W7 220 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 LAYNQ6UX15 382 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 ADIPOR2Q86V24 386 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 PSTKQ8IV42 348 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 RHOT1Q8IXI2 618 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 SNIP1Q8TAD8 396 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 KIAA1524Q8TCG1 905 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 FGF11Q92914 225 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 SKA1Q96BD8 255 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 CELF6Q96J87 481 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 CNDP2Q96KP4 475 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 ACE2Q9BYF1 805 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 NRSN2Q9GZP1 204 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 C6orf106Q9H6K1 298 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 TRMT1Q9NXH9 659 aaKnown RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 PLA2G4CQ9UP65 541 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 NEU3Q9UQ49 428 aa13.58□□□□□ -0.24
CCDC40-205ENST00000571028 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.58□□□□□ -0.24
CCDC40-205ENST00000571028 CBX4O00257 560 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 SNAP91O60641 907 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 LDOC1O95751 146 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-205ENST00000571028 SEMA4FO95754 770 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 ATP5BP06576 529 aaKnown RBP13.57□□□□□ -0.24
CCDC40-205ENST00000571028 ITGAVP06756 1048 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 KDELR1P24390 212 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 COPAP53621 1224 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 OXCT1P55809 520 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 CLDN6P56747 220 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 GNA12Q03113 381 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 ZNF234Q14588 700 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 DPYSL2Q16555 572 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 HES3Q5TGS1 186 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 LEKR1Q6ZMV7 388 aa13.57□□□□□ -0.24
CCDC40-205ENST00000571028 POLNQ7Z5Q5 900 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms