RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 USP41Q3LFD5 358 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 ITPRIPL1Q6GPH6 555 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 NRSN1Q8IZ57 195 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 PPM1NQ8N819 430 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 APBB2Q92870 758 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 BADQ92934 168 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 RADILQ96JH8 1075 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 SLC22A12Q96S37 553 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 RNF38Q9H0F5 515 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 SMOC1Q9H4F8 434 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 ZC3H7BQ9UGR2 993 aaKnown RBP8.72□□□□□ -1.01
TCF4-241ENST00000568740 SLC12A6Q9UHW9 1150 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 VCANP13611 3396 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 FRMPD3Q5JV73 1810 aa8.72□□□□□ -1.01
TCF4-241ENST00000568740 DNAH14Q0VDD8 3507 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 A0A0A0MRY4 1105 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 SLC38A8A6NNN8 435 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 J3KR12 359 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 F9P00740 461 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 PDGFAP04085 211 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 HAPLN1P10915 354 aaPredicted RBP8.71□□□□□ -1.01
TCF4-241ENST00000568740 NFKB1P19838 968 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 NR2C2P49116 596 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 SH3BGRP55822 239 aaPredicted RBP8.71□□□□□ -1.01
TCF4-241ENST00000568740 SLC9A5Q14940 896 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 SEPT7Q16181 437 aaKnown RBP8.71□□□□□ -1.01
TCF4-241ENST00000568740 TAF12Q16514 161 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 PCSK7Q16549 785 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 CNKSR3Q6P9H4 555 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 PABPC5Q96DU9 382 aaKnown RBP8.71□□□□□ -1.01
TCF4-241ENST00000568740 ZNF778Q96MU6 729 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 SPATA13Q96N96 652 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 GORASP1Q9BQQ3 440 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 RSRP1Q9BUV0 290 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 TRPC7Q9HCX4 862 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 NEU3Q9UQ49 428 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 SCML2Q9UQR0 700 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 TSC2P49815 1807 aa8.71□□□□□ -1.01
TCF4-241ENST00000568740 KCNU1A8MYU2 1149 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 PRRG1O14668 218 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 TBC1D4O60343 1298 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 FSBPO95073 299 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 IGLV3-25P01717 112 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 HSPA8P11142 646 aaKnown RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 CPEP16870 476 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 ZFXP17010 805 aaPredicted RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 LPOP22079 712 aaPredicted RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 GRK2P25098 689 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 GARSP41250 739 aaKnown RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 COL9A2Q14055 689 aaPredicted RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 GRIN2CQ14957 1233 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 PDK1Q15118 436 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 MS4A13Q5J8X5 152 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 CERCAMQ5T4B2 595 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 FBXL22Q6P050 247 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 FBXO46Q6PJ61 603 aaPredicted RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 VSTM1Q6UX27 236 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 LYPD8Q6UX82 237 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 GPR155Q7Z3F1 870 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 DENND1CQ8IV53 801 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 GALNT12Q8IXK2 581 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 DNAAF3Q8N9W5 541 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 GABPB2Q8TAK5 448 aaPredicted RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 GIMAP1Q8WWP7 306 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 NTAN1Q96AB6 310 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 PGM2Q96G03 612 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 FAM210AQ96ND0 272 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 TOX2Q96NM4 488 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 PAFAH2Q99487 392 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 SMG9Q9H0W8 520 aaKnown RBP8.71□□□□□ -1.02
TCF4-241ENST00000568740 SMOC2Q9H3U7 446 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.71□□□□□ -1.02
TCF4-241ENST00000568740 PCDHB3Q9Y5E6 796 aa8.71□□□□□ -1.02
TCF4-241ENST00000568740 A0A0D9SEW6 157 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 GRXCR1A8MXD5 290 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 PMPCBO75439 489 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 GCATO75600 419 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 TIMP1P01033 207 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 PAPOLAP51003 745 aaKnown RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 SGSHP51688 502 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 RPS24P62847 133 aaKnown RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 TWF1Q12792 350 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 PAFAH1B3Q15102 231 aaKnown RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 PRKD1Q15139 912 aaPredicted RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 ARTNQ5T4W7 220 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 AGBL2Q5U5Z8 902 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 IRGCQ6NXR0 463 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 UNC5AQ6ZN44 842 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 SPATS2Q86XZ4 545 aaKnown RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 OR52K2Q8NGK3 314 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 IRGQQ8WZA9 623 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 AZIN2Q96A70 460 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 PGAP3Q96FM1 320 aaPredicted RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 FUBP3Q96I24 572 aaKnown RBP eCLIP8.7□□□□□ -1.02
TCF4-241ENST00000568740 RPRD1AQ96P16 312 aaPredicted RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 TMEM121BQ9BXQ6 578 aaPredicted RBP8.7□□□□□ -1.02
TCF4-241ENST00000568740 BRD8Q9H0E9 1235 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 FBXO44Q9H4M3 255 aa8.7□□□□□ -1.02
TCF4-241ENST00000568740 CERS4Q9HA82 394 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms