RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SIGLEC6O43699 453 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 MBD3O95983 291 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 PAK4O96013 591 aaPredicted RBP19.22■□□□□ 0.67
SPSB3-210ENST00000568416 GIMD1P0DJR0 217 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 ATP1A3P13637 1013 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 FERP16591 822 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 ACP1P24666 158 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 RPL7AP62424 266 aaKnown RBP19.22■□□□□ 0.67
SPSB3-210ENST00000568416 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
SPSB3-210ENST00000568416 ZNF211Q13398 564 aaPredicted RBP19.22■□□□□ 0.67
SPSB3-210ENST00000568416 ZNF805Q5CZA5 627 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 EFHC2Q5JST6 749 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 ACAD10Q6JQN1 1059 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 KYAT3Q6YP21 454 aaKnown RBP19.22■□□□□ 0.67
SPSB3-210ENST00000568416 LEKR1Q6ZMV7 388 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 ZSCAN30Q86W11 494 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 RYBPQ8N488 228 aaPredicted RBP19.22■□□□□ 0.67
SPSB3-210ENST00000568416 AOPEPQ8N6M6 819 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 RTL3Q8N8U3 475 aaKnown RBP19.22■□□□□ 0.67
SPSB3-210ENST00000568416 BAP1Q92560 729 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 RAB7BQ96AH8 199 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 IFT43Q96FT9 208 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 MCEEQ96PE7 176 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 SYT11Q9BT88 431 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 CAAP1Q9H8G2 361 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 UCKL1Q9NWZ5 548 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 FZD10Q9ULW2 581 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 CFAP47Q6ZTR5 3102 aa19.22■□□□□ 0.67
SPSB3-210ENST00000568416 ZSCAN5CA6NGD5 496 aaPredicted RBP19.21■□□□□ 0.67
SPSB3-210ENST00000568416 WASH4PA8MWX3 477 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 RAD51BO15315 384 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 TSPAN6O43657 245 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 PIAS2O75928 621 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 POP4O95707 220 aaKnown RBP19.21■□□□□ 0.67
SPSB3-210ENST00000568416 JUPP14923 745 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 EPHB2P29323 1055 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 HNF1BP35680 557 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 AIF1P55008 147 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 SNRPD1P62314 119 aaKnown RBP19.21■□□□□ 0.67
SPSB3-210ENST00000568416 TYRO3Q06418 890 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 MYLK3Q32MK0 819 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 HES3Q5TGS1 186 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 SCYL2Q6P3W7 929 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 Q6ZSR6 202 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 IRF2BP2Q7Z5L9 587 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 DCP2Q8IU60 420 aaKnown RBP19.21■□□□□ 0.67
SPSB3-210ENST00000568416 MCOLN2Q8IZK6 566 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 OR4C6Q8NH72 309 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 LENG8Q96PV6 779 aaPredicted RBP19.21■□□□□ 0.67
SPSB3-210ENST00000568416 KLF6Q99612 283 aaPredicted RBP19.21■□□□□ 0.67
SPSB3-210ENST00000568416 CNPY3Q9BT09 278 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 C1QTNF2Q9BXJ5 285 aa19.21■□□□□ 0.67
SPSB3-210ENST00000568416 ANKRD62A6NC57 917 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 POM121BA6NF01 834 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 KRIT1O00522 736 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 TEX33O43247 280 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 SPINT1O43278 529 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 BUB1O43683 1085 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 UGT2B4P06133 528 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 CCDC172P0C7W6 258 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 YBEYP58557 167 aaPredicted RBP19.2■□□□□ 0.66
SPSB3-210ENST00000568416 OGDHQ02218 1023 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 ATXN7L2Q5T6C5 722 aaPredicted RBP19.2■□□□□ 0.66
SPSB3-210ENST00000568416 C19orf48Q6RUI8 117 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 PTAR1Q7Z6K3 402 aaPredicted RBP19.2■□□□□ 0.66
SPSB3-210ENST00000568416 CASKIN2Q8WXE0 1202 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 ASB12Q8WXK4 309 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 RFFLQ8WZ73 363 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 OSBPL1AQ9BXW6 950 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 KLC2Q9H0B6 622 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 GGT7Q9UJ14 662 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 ITM2BQ9Y287 266 aa19.2■□□□□ 0.66
SPSB3-210ENST00000568416 IGLON5A6NGN9 336 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 TMCC1O94876 653 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 TARDBPQ13148 414 aaKnown RBP eCLIP19.19■□□□□ 0.66
SPSB3-210ENST00000568416 FZD2Q14332 565 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 INO80DQ53TQ3 878 aaPredicted RBP19.19■□□□□ 0.66
SPSB3-210ENST00000568416 GDPD4Q6W3E5 623 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 CACTIN-AS1Q8N1I8 211 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 UMODL1-AS1Q8N2C9 162 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 HMCESQ96FZ2 354 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 KLHL32Q96NJ5 620 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 EPAS1Q99814 870 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 TTYH3Q9C0H2 523 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 SCUBE2Q9NQ36 999 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 TAS2R14Q9NYV8 317 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 TMEM63CQ9P1W3 806 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 MYO6Q9UM54 1294 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 CABIN1Q9Y6J0 2220 aa19.19■□□□□ 0.66
SPSB3-210ENST00000568416 SPTY2D1-AS1A0A0U1RR47 76 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 RASA4BC9J798 803 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 FPGTO14772 594 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 AREL1O15033 823 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 FFAR2O15552 330 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 RASA4O43374 803 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 CREB3O43889 395 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 TNFAIP3P21580 790 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 RABIFP47224 123 aa19.18■□□□□ 0.66
SPSB3-210ENST00000568416 INSM1Q01101 510 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-210ENST00000568416 SGCGQ13326 291 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms