RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 SPINT1O43278 529 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 SPOPO43791 374 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 MAFKO60675 156 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 GJB3O75712 270 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 IPO7O95373 1038 aaKnown RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 IGSF6O95976 241 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 KRT1P04264 644 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 ITGB7P26010 798 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 MAOBP27338 520 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 SERPINB6P35237 376 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 HOXD12P35452 270 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 RECQLP46063 649 aaPredicted RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 DNA2P51530 1060 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 RHOAP61586 193 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 SNRPD1P62314 119 aaKnown RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 CCZ1BP86790 482 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 CCZ1P86791 482 aaPredicted RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 GBE1Q04446 702 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 SLC10A7Q0GE19 358 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 SLC10A2Q12908 348 aaPredicted RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 SLC9A4Q6AI14 798 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 NCEH1Q6PIU2 408 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 MFSD7Q6UXD7 560 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 PARS2Q7L3T8 475 aaKnown RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 MAP7D3Q8IWC1 876 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 OR2T34Q8NGX1 318 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 GANCQ8TET4 914 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 KRT35Q92764 455 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 FOXJ1Q92949 421 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 BIRC7Q96CA5 298 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 GDAP1L1Q96MZ0 367 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 RNF157Q96PX1 679 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 OMDQ99983 421 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 HDAC8Q9BY41 377 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 ZDHHC6Q9H6R6 413 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 EBF2Q9HAK2 575 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 SP110Q9HB58 689 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 CAPN10Q9HC96 672 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 EVLQ9UI08 416 aaPredicted RBP9.95□□□□□ -0.82
CLK3-220ENST00000567992 NCKAP1Q9Y2A7 1128 aa9.95□□□□□ -0.82
CLK3-220ENST00000567992 CACNA1AO00555 2505 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 LNP1A1A4G5 178 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 MEI4A8MW99 385 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 GOLGA6L6A8MZA4 724 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 GDF9O60383 454 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 MAP3K6O95382 1288 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 UGT2B4P06133 528 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 CR2P20023 1033 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 GARSP41250 739 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 DPP6P42658 865 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 CDKN2BP42772 138 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 ADCY2Q08462 1091 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 RFTN1Q14699 578 aaPredicted RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 MYLK3Q32MK0 819 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 WDR45BQ5MNZ6 344 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 KIAA0895LQ68EN5 471 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 SLC23A3Q6PIS1 610 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 ERN2Q76MJ5 926 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 KIAA1328Q86T90 577 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 KATNAL2Q8IYT4 538 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 PGBD5Q8N414 524 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 ZCCHC9Q8N567 271 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 ATPAF2Q8N5M1 289 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 GPR161Q8N6U8 529 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 TSEN2Q8NCE0 465 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 OR14C36Q8NHC7 312 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 LRIG1Q96JA1 1093 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 CALR3Q96L12 384 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 ZNF599Q96NL3 588 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 OLFM3Q96PB7 478 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 PSKH2Q96QS6 385 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 DDX56Q9NY93 547 aaKnown RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 DTLQ9NZJ0 730 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
CLK3-220ENST00000567992 ADGRG1Q9Y653 693 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 LRRK1Q38SD2 2015 aa9.94□□□□□ -0.82
CLK3-220ENST00000567992 TMEM131Q92545 1883 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 TSPAN11A1L157 253 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 GOLGA6L3A6NEY3 463 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 FAM47DPA6NHR8 397 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 LRRC72A6NJI9 287 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 KRIT1O00522 736 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 ARHGAP6O43182 974 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 LATO43561 262 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 PALMO75781 387 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 FSBPO95073 299 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 PIGNO95427 931 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 POP4O95707 220 aaKnown RBP9.93□□□□□ -0.82
CLK3-220ENST00000567992 TNNT1P13805 278 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 ADRB3P13945 408 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 CTNNA1P35221 906 aaKnown RBP9.93□□□□□ -0.82
CLK3-220ENST00000567992 ABL2P42684 1182 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 CSNK1DP48730 415 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 CCR5P51681 352 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 BNC1Q01954 994 aa9.93□□□□□ -0.82
CLK3-220ENST00000567992 LMNB2Q03252 620 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms