RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	GRIN3A	Q8TCU5	1115 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	CASKIN2	Q8WXE0	1202 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	KLK6	Q92876	244 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	IQCD	Q96DY2	449 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	TRIM11	Q96F44	468 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	KLHDC7B	Q96G42	594 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	LRIG1	Q96JA1	1093 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	FEM1C	Q96JP0	617 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ELF4	Q99607	663 aa	Predicted RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	EIF3C	Q99613	913 aa	Known RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	NCAPG	Q9BPX3	1015 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	TTYH3	Q9C0H2	523 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ISCU	Q9H1K1	167 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	NOL6	Q9H6R4	1146 aa	Known RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZDHHC6	Q9H6R6	413 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ERVMER34-1	Q9H9K5	563 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	MRPL47	Q9HD33	250 aa	Known RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	GDF3	Q9NR23	364 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	CNOT8	Q9UFF9	292 aa	Known RBP	7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	PCSK1N	Q9UHG2	260 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	NEU3	Q9UQ49	428 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	BTBD3	Q9Y2F9	522 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	ACTL7A	Q9Y615	435 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	WASF2	Q9Y6W5	498 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	USP24	Q9UPU5	2620 aa		7.04	□□□□□ -1.28
SF3B3-209	ENST00000567635	AKAP13	Q12802	2813 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	FAM221B	A6H8Z2	402 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	C16orf96	A6NNT2	1141 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RASA4B	C9J798	803 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	KRIT1	O00522	736 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	YKT6	O15498	198 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	DAPK3	O43293	454 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RASA4	O43374	803 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	TNFSF14	O43557	240 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RRP9	O43818	475 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	PRPSAP2	O60256	369 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	GSR	P00390	522 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	SERPING1	P05155	500 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ITGAV	P06756	1048 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ATXN1L	P0C7T5	689 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	FTH1P19	P0C7X4	201 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ADRB3	P13945	408 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	PBX1	P40424	430 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RXRG	P48443	463 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	HCAR3	P49019	387 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARRB1	P49407	418 aa	Predicted RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	NEK3	P51956	506 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	NDST2	P52849	883 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	NXPH1	P58417	271 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	TPI1	P60174	286 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RPS21	P63220	83 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZBED6	P86452	979 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	IL9R	Q01113	521 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RAD51	Q06609	339 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	SGCG	Q13326	291 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	SERINC3	Q13530	473 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ACAP1	Q15027	740 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ST3GAL2	Q16842	350 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	INAVA	Q3KP66	663 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	PARP15	Q460N3	678 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	INO80D	Q53TQ3	878 aa	Predicted RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZNF805	Q5CZA5	627 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	E4F1	Q66K89	784 aa	Predicted RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RAB44	Q7Z6P3	723 aa	Predicted RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	VPS36	Q86VN1	386 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	SPATS2	Q86XZ4	545 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	PSTK	Q8IV42	348 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	OXR1	Q8N573	874 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARFGAP1	Q8N6T3	406 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	PNPLA1	Q8N8W4	532 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	OR2AP1	Q8NGE2	309 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	FNIP1	Q8TF40	1166 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	CPLX3	Q8WVH0	158 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ADAMTS14	Q8WXS8	1223 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	RAB7B	Q96AH8	199 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZNF653	Q96CK0	615 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	HMCES	Q96FZ2	354 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	SLC17A9	Q9BYT1	436 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	TM6SF2	Q9BZW4	377 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	KLC2	Q9H0B6	622 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	DHX35	Q9H5Z1	703 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	GPATCH2L	Q9NWQ4	482 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	MYO1A	Q9UBC5	1043 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	KLK13	Q9UKR3	277 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	CAPN11	Q9UMQ6	739 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	AP4E1	Q9UPM8	1137 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZFR2	Q9UPR6	939 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	LUC7L2	Q9Y383	392 aa	Known RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	MSRB2	Q9Y3D2	182 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	NEUROG3	Q9Y4Z2	214 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	SCIN	Q9Y6U3	715 aa		7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	COL5A1	P20908	1838 aa	Predicted RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.03	□□□□□ -1.28
SF3B3-209	ENST00000567635	APC2	O95996	2303 aa		7.02	□□□□□ -1.28
SF3B3-209	ENST00000567635	ANKRD11	Q6UB99	2663 aa	Predicted RBP	7.02	□□□□□ -1.29
SF3B3-209	ENST00000567635	ARHGAP42	A6NI28	874 aa		7.02	□□□□□ -1.29
SF3B3-209	ENST00000567635	GOLGA8CP	A6NN73	597 aa		7.02	□□□□□ -1.29
SF3B3-209	ENST00000567635	C1QTNF9B	B2RNN3	333 aa		7.02	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms