RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 FEM1CQ96JP0 617 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 TBCBQ99426 244 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 NPY6RQ99463 290 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 TM6SF2Q9BZW4 377 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 CLMPQ9H6B4 373 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 ZDHHC6Q9H6R6 413 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 WDCPQ9H6R7 721 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 SYNCQ9H7C4 482 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 PCDHGC3Q9UN70 934 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 COL12A1Q99715 3063 aa15.78■□□□□ 0.12
PALB2-205ENST00000567003 PTPN13Q12923 2485 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 BICDL2A1A5D9 508 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 EME2A4GXA9 379 aaPredicted RBP15.77■□□□□ 0.12
PALB2-205ENST00000567003 DRGXA6NNA5 263 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 CDRT15L2A8MXV6 281 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 FPGTO14772 594 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 SRGAP2O75044 1071 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 ZMPSTE24O75844 475 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 TNFSF15O95150 251 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 CELA2BP08218 269 aaPredicted RBP15.77■□□□□ 0.12
PALB2-205ENST00000567003 OR1E1P30953 314 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 SERPINH1P50454 418 aaKnown RBP15.77■□□□□ 0.12
PALB2-205ENST00000567003 MARSP56192 900 aaKnown RBP15.77■□□□□ 0.12
PALB2-205ENST00000567003 ARF5P84085 180 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 MORC3Q14149 939 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 LRRC73Q5JTD7 316 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 IGF2-ASQ6U949 168 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 ENOSF1Q7L5Y1 443 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 SHC3Q92529 594 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 MED8Q96G25 268 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 TIGD1Q96MW7 591 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 IL12RB2Q99665 862 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 HEPHQ9BQS7 1158 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 ATP13A1Q9HD20 1204 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.77■□□□□ 0.12
PALB2-205ENST00000567003 ZNF212Q9UDV6 495 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 CSNK1G3Q9Y6M4 447 aa15.77■□□□□ 0.12
PALB2-205ENST00000567003 GNA14O95837 355 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 ADKP55263 362 aaKnown RBP15.76■□□□□ 0.11
PALB2-205ENST00000567003 DEUP1Q05D60 604 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 PAK1Q13153 545 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 SRSF6Q13247 344 aaKnown RBP15.76■□□□□ 0.11
PALB2-205ENST00000567003 SGCGQ13326 291 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 CARD16Q5EG05 197 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 PRRT3Q5FWE3 981 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 BRMS1LQ5PSV4 323 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 LRRC31Q6UY01 552 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 CCDC81Q6ZN84 652 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 PRICKLE2Q7Z3G6 844 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 SLC47A2Q86VL8 602 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 CREBRFQ8IUR6 639 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 RYBPQ8N488 228 aaPredicted RBP15.76■□□□□ 0.11
PALB2-205ENST00000567003 PCDH20Q8N6Y1 951 aaKnown RBP15.76■□□□□ 0.11
PALB2-205ENST00000567003 ZNF397Q8NF99 534 aaPredicted RBP15.76■□□□□ 0.11
PALB2-205ENST00000567003 FAM174AQ8TBP5 190 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 CCDC3Q9BQI4 270 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 LRRC61Q9BV99 259 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 BOCQ9BWV1 1114 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 C1QTNF2Q9BXJ5 285 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 TRIM4Q9C037 500 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 APEX2Q9UBZ4 518 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 APOBEC3BQ9UH17 382 aaKnown RBP15.76■□□□□ 0.11
PALB2-205ENST00000567003 HOOK1Q9UJC3 728 aaKnown RBP15.76■□□□□ 0.11
PALB2-205ENST00000567003 SALL4Q9UJQ4 1053 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 PCDHGA8Q9Y5G5 932 aa15.76■□□□□ 0.11
PALB2-205ENST00000567003 TLN1Q9Y490 2541 aaKnown RBP15.75■□□□□ 0.11
PALB2-205ENST00000567003 IGLV3-10A0A075B6K4 115 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 C16orf96A6NNT2 1141 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 AP1G1O43747 822 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 CD160O95971 181 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 IGFALSP35858 605 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 ACVRL1P37023 503 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 PPP1R2P41236 205 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 PFN3P60673 137 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 KCNC4Q03721 635 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 MTA1Q13330 715 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 C2CD6Q53TS8 623 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 TRNP1Q6NT89 227 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 FOXR2Q6PJQ5 311 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 LEKR1Q6ZMV7 388 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 B3GNT8Q7Z7M8 397 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 VPS36Q86VN1 386 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 PHACTR4Q8IZ21 702 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 EXD3Q8N9H8 876 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 WDR36Q8NI36 951 aaKnown RBP15.75■□□□□ 0.11
PALB2-205ENST00000567003 CEP44Q9C0F1 390 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 CLPBQ9H078 707 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 HECAQ9UBI9 543 aaPredicted RBP15.75■□□□□ 0.11
PALB2-205ENST00000567003 SPASTQ9UBP0 616 aa15.75■□□□□ 0.11
PALB2-205ENST00000567003 ILVBLA1L0T0 632 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 AGRPO00253 132 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 NEMP1O14524 444 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 ARHGAP6O43182 974 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 EFSO43281 561 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 WISP1O95388 367 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 ITIH2P19823 946 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 CLCN1P35523 988 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 KRT9P35527 623 aa15.74■□□□□ 0.11
PALB2-205ENST00000567003 NFKB2Q00653 900 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms