RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 SUPT3HO75486 399 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 SLC35E2BP0CK96 405 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 MYF6P23409 242 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 GABRB3P28472 473 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 SLC12A1Q13621 1099 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 AMHR2Q16671 573 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 C6orf10Q5SRN2 563 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 C1QTNF12Q5T7M4 302 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 LRRC8EQ6NSJ5 796 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 HACD2Q6Y1H2 254 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 PLPPR4Q7Z2D5 763 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 FSTL5Q8N475 847 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-215ENST00000566843 NETO2Q8NC67 525 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 CCNYQ8ND76 341 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 TNIP2Q8NFZ5 429 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 RNF139Q8WU17 664 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 KCTD4Q8WVF5 259 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 SCYL1Q96KG9 808 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 COX4I2Q96KJ9 171 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 RHOJQ9H4E5 214 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 TMEM181Q9P2C4 612 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 TRIM64BA6NI03 449 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 ERI2A8K979 691 aaKnown RBP15.87■□□□□ 0.13
COMMD4-215ENST00000566843 BOLA2-SMG1P6H3BVE0 249 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 SOCS2O14508 198 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 SOCS7O14512 581 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 CLASP2O75122 1294 aaKnown RBP15.87■□□□□ 0.13
COMMD4-215ENST00000566843 TGFB3P10600 412 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 PTPN3P26045 913 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 HMGCS2P54868 508 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 SQLEQ14534 574 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 KYAT1Q16773 422 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 TSTD2Q5T7W7 516 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 ERMP1Q7Z2K6 904 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 LYSMD3Q7Z3D4 306 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 CENPLQ8N0S6 344 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-215ENST00000566843 ZNF420Q8TAQ5 688 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-215ENST00000566843 BORCS5Q969J3 196 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 GPR78Q96P69 363 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 TCF12Q99081 682 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 APBA2Q99767 749 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 SPAG4Q9NPE6 437 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 TBC1D23Q9NUY8 699 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 PAIP2BQ9ULR5 123 aaKnown RBP15.87■□□□□ 0.13
COMMD4-215ENST00000566843 WDR37Q9Y2I8 494 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 ZNF711Q9Y462 761 aa15.87■□□□□ 0.13
COMMD4-215ENST00000566843 PSMD12O00232 456 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-215ENST00000566843 DLGAP1O14490 977 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 USP12O75317 370 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 CYP2C9P11712 490 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 PTPRAP18433 802 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 CYP2B6P20813 491 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 ZNF829Q3KNS6 432 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-215ENST00000566843 PDCD4Q53EL6 469 aaKnown RBP15.86■□□□□ 0.13
COMMD4-215ENST00000566843 CERCAMQ5T4B2 595 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 INTS11Q5TA45 600 aaKnown RBP15.86■□□□□ 0.13
COMMD4-215ENST00000566843 FAM45BPQ6NSW5 357 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 NT5DC4Q86YG4 428 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 FAM45AQ8TCE6 357 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 SPPL2BQ8TCT7 592 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 GPR20Q99678 358 aa15.86■□□□□ 0.13
COMMD4-215ENST00000566843 ADARB2Q9NS39 739 aaKnown RBP15.86■□□□□ 0.13
COMMD4-215ENST00000566843 KLHL8Q9P2G9 620 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-215ENST00000566843 TMEM233B4DJY2 109 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 PHGDHO43175 533 aaKnown RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 INHBBP09529 407 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 ZNF12P17014 697 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 CKMT2P17540 419 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 MAGEA10P43363 369 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 DNAJB13P59910 316 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 POU5F1BQ06416 359 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 USP10Q14694 798 aaKnown RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 DGKDQ16760 1214 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 ANKDD1AQ495B1 522 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 SAMD4BQ5PRF9 694 aaKnown RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 FAM131BQ86XD5 332 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 SGF29Q96ES7 293 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 NPLQ9BXD5 320 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 SETD4Q9NVD3 440 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 C19orf81C9J6K1 198 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 DCLK1O15075 740 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 DCKP27707 260 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 TTKP33981 857 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 MATKP42679 507 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 GLRBP48167 497 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 POLD2P49005 469 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 NME5P56597 212 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 NAA20P61599 178 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 TMEM62Q0P6H9 643 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 BST2Q10589 180 aaKnown RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 RALGDSQ12967 914 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 EFCAB12Q6NXP0 572 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 APOBEC3FQ8IUX4 373 aaKnown RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 C7orf31Q8N865 590 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 DNAAF3Q8N9W5 541 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 TRAPPC12Q8WVT3 735 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 FAR2Q96K12 515 aa15.85■□□□□ 0.13
COMMD4-215ENST00000566843 MLPHQ9BV36 600 aaPredicted RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 RPF2Q9H7B2 306 aaKnown RBP15.85■□□□□ 0.13
COMMD4-215ENST00000566843 MRM3Q9HC36 420 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms