RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ALOX15BO15296 676 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 USP12O75317 370 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 MMP2P08253 660 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 POLR2EP19388 210 aaKnown RBP19.01■□□□□ 0.63
COMMD4-213ENST00000565834 CES1P23141 567 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 CTSOP43234 321 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-213ENST00000565834 MAGEA3P43357 314 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 RHOAP61586 193 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 OLIG2Q13516 323 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 FASTKD3Q14CZ7 662 aaKnown RBP19.01■□□□□ 0.63
COMMD4-213ENST00000565834 UAP1Q16222 522 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-213ENST00000565834 GEN1Q17RS7 908 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 ATP11CQ8NB49 1132 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 HLA-CQ95604 372 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 EXOC2Q96KP1 924 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 TBL1YQ9BQ87 522 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 GTSE1Q9NYZ3 720 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 DEC1Q9P2X7 70 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 LHX3Q9UBR4 397 aa19.01■□□□□ 0.63
COMMD4-213ENST00000565834 K7ERQ8 282 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 SERPINF2P08697 491 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 RGRP47804 291 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 SCNN1BP51168 640 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 WNT3AP56704 352 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 SKOR1P84550 965 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 ECT2LQ008S8 904 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 CBLBQ13191 982 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 HP1BP3Q5SSJ5 553 aaPredicted RBP19■□□□□ 0.63
COMMD4-213ENST00000565834 GRAMD4Q6IC98 578 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 KDELC1Q6UW63 502 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 OR52K1Q8NGK4 314 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 TTC17Q96AE7 1141 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 TADA1Q96BN2 335 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 RPL10LQ96L21 214 aaKnown RBP19■□□□□ 0.63
COMMD4-213ENST00000565834 MRGPRX2Q96LB1 330 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 C9orf72Q96LT7 481 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 FICDQ9BVA6 458 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 SCUBE2Q9NQ36 999 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 CASS4Q9NQ75 786 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 NINJ2Q9NZG7 142 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 HS3ST2Q9Y278 367 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 EYSQ5T1H1 3165 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 TICRRQ7Z2Z1 1910 aa19■□□□□ 0.63
COMMD4-213ENST00000565834 C2CD4DB7Z1M9 353 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 INSIG1O15503 277 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 ATP8B1O43520 1251 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 SMAD6O43541 496 aaKnown RBP18.99■□□□□ 0.63
COMMD4-213ENST00000565834 GJB3O75712 270 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 CR2P20023 1033 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 SLC6A11P48066 632 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 STK19P49842 368 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-213ENST00000565834 NSUN2Q08J23 767 aaKnown RBP eCLIP18.99■□□□□ 0.63
COMMD4-213ENST00000565834 SLC14A2Q15849 920 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 PCSK7Q16549 785 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 KYNUQ16719 465 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 ITPRIPL2Q3MIP1 535 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 CFAP58Q5T655 872 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 TMEM215Q68D42 235 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 RNF135Q8IUD6 432 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 ANKMY2Q8IV38 441 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 DNAAF3Q8N9W5 541 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 TTC8Q8TAM2 541 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 PYROXD1Q8WU10 500 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 LRRC39Q96DD0 335 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 TTC25Q96NG3 672 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 NUDCD1Q96RS6 583 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 APOL2Q9BQE5 337 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 BRD9Q9H8M2 597 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 VIPAS39Q9H9C1 493 aa18.99■□□□□ 0.63
COMMD4-213ENST00000565834 PIH1D1Q9NWS0 290 aaKnown RBP18.99■□□□□ 0.63
COMMD4-213ENST00000565834 SPTBN5Q9NRC6 3674 aaKnown RBP18.99■□□□□ 0.63
COMMD4-213ENST00000565834 AP3B1O00203 1094 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 MAP2K7O14733 419 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 RIPK2O43353 540 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 TTC4O95801 387 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 AGTP01019 485 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 SRCP12931 536 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 GJA4P35212 333 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 ADRA1AP35348 466 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 ELK3P41970 407 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 SESN2P58004 480 aaPredicted RBP18.98■□□□□ 0.63
COMMD4-213ENST00000565834 CDH17Q12864 832 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 CCDC38Q502W7 563 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 DENND2CQ68D51 928 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 SH2D3CQ8N5H7 860 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 FBXO36Q8NEA4 188 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 EPB41L4BQ9H329 900 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 NOD2Q9HC29 1040 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 CHMP2BQ9UQN3 213 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 TEX264Q9Y6I9 313 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 ARNTLO00327 626 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 SASH3O75995 380 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 ACSL3O95573 720 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 ATP5BP06576 529 aaKnown RBP18.98■□□□□ 0.63
COMMD4-213ENST00000565834 KDSRQ06136 332 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 IHHQ14623 411 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 RALGPS1Q5JS13 557 aa18.98■□□□□ 0.63
COMMD4-213ENST00000565834 HABP4Q5JVS0 413 aaKnown RBP18.98■□□□□ 0.63
COMMD4-213ENST00000565834 AGGF1Q8N302 714 aaeCLIP18.98■□□□□ 0.63
COMMD4-213ENST00000565834 WDR83Q9BRX9 315 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms