RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, human

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH5-205	ENST00000565334	STYX	Q8WUJ0	223 aa		18.83	■□□□□ 0.6
CDH5-205	ENST00000565334	TRAPPC9	Q96Q05	1148 aa		18.83	■□□□□ 0.6
CDH5-205	ENST00000565334	COG4	Q9H9E3	785 aa		18.83	■□□□□ 0.6
CDH5-205	ENST00000565334	VPS45	Q9NRW7	570 aa		18.83	■□□□□ 0.6
CDH5-205	ENST00000565334	VTI1B	Q9UEU0	232 aa		18.83	■□□□□ 0.6
CDH5-205	ENST00000565334		A0A087X1B8	175 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	SYN3	O14994	580 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	FKBP6	O75344	327 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	STMN1	P16949	149 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	TRIM32	Q13049	653 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	PRKAA1	Q13131	559 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	MUM1	Q2TAK8	710 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	NOMO2	Q5JPE7	1267 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	SNX30	Q5VWJ9	437 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	NAPRT	Q6XQN6	538 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	FAM43B	Q6ZT52	329 aa	Predicted RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	C2CD4A	Q8NCU7	369 aa	Predicted RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	FBXO27	Q8NI29	283 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	CALML6	Q8TD86	181 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	MRGPRX2	Q96LB1	330 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	ARHGAP39	Q9C0H5	1083 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	VCX	Q9H320	206 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	ABI2	Q9NYB9	513 aa	Predicted RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	FAM95C	A0A1B0GW59	222 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	SLC22A2	O15244	555 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	VAPB	O95292	243 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	SLC35E2B	P0CK96	405 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	ABCG1	P45844	678 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	CD151	P48509	253 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	NUMB	P49757	651 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	TBX4	P57082	545 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	FAM189B	P81408	668 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	PRKCZ	Q05513	592 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	TNK2	Q07912	1038 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	LRRC74B	Q6ZQY2	392 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	COLGALT2	Q8IYK4	626 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	ATP6V0D2	Q8N8Y2	350 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	ZNF333	Q96JL9	665 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	ZYG11B	Q9C0D3	744 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	OLA1	Q9NTK5	396 aa	Known RBP	18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	TMEM248	Q9NWD8	314 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	IRAK4	Q9NWZ3	460 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	IL37	Q9NZH6	218 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	SLC7A8	Q9UHI5	535 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	PCDHB5	Q9Y5E4	795 aa		18.82	■□□□□ 0.6
CDH5-205	ENST00000565334	HEATR9	A2RTY3	570 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	MOCS2	O96007	188 aa	Predicted RBP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	ALDH1A1	P00352	501 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	GABRB3	P28472	473 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	CCND3	P30281	292 aa	Predicted RBP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	SERPINB5	P36952	375 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	GMPR	P36959	345 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	AP2B1	P63010	937 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	MTA1	Q13330	715 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	LAMB3	Q13751	1172 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	LRRC8E	Q6NSJ5	796 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	ESRP1	Q6NXG1	681 aa	Known RBP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	AAGAB	Q6PD74	315 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	RIPOR1	Q6ZS17	1223 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	RNF180	Q86T96	592 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	MYLK4	Q86YV6	388 aa	Predicted RBP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	TMEM151A	Q8N4L1	468 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	ACVR1C	Q8NER5	493 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	SCYL1	Q96KG9	808 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	TRMT13	Q9NUP7	481 aa	Known RBP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	NDFIP2	Q9NV92	336 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	RUVBL2	Q9Y230	463 aa	Known RBP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	TLL2	Q9Y6L7	1015 aa		18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	MYO18A	Q92614	2054 aa	Known RBP	18.81	■□□□□ 0.6
CDH5-205	ENST00000565334	GOLGA8T	H3BQL2	631 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	MATN2	O00339	956 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	HDAC3	O15379	428 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	CCNT2	O60583	730 aa	Known RBP	18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	TBX10	O75333	385 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	PAPSS2	O95340	614 aa	Predicted RBP	18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	COL6A1	P12109	1028 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	ADSL	P30566	484 aa	Predicted RBP	18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	RPL14	P50914	215 aa	Known RBP	18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	POU4F1	Q01851	419 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	TMCO4	Q5TGY1	634 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	PIK3R6	Q5UE93	754 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	KDELC1	Q6UW63	502 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	GALNT7	Q86SF2	657 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	C14orf80	Q86SX3	495 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	ZNF683	Q8IZ20	524 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	ATP13A1	Q9HD20	1204 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	CLIC5	Q9NZA1	410 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	DPPA5	A6NC42	116 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	TARM1	B6A8C7	271 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	PMPCB	O75439	489 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	OR4Q2	P0C623	313 aa		18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	NCF2	P19878	526 aa	Predicted RBP	18.8	■□□□□ 0.6
CDH5-205	ENST00000565334	GLDC	P23378	1020 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms