RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 MFN1Q8IWA4 741 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 C4orf33Q8N1A6 199 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 MFSD3Q96ES6 412 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 FEM1AQ9BSK4 669 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 SMG9Q9H0W8 520 aaKnown RBP19.82■□□□□ 0.76
CLN6-205ENST00000564846 EPN3Q9H201 632 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 ZFATQ9P243 1243 aa19.82■□□□□ 0.76
CLN6-205ENST00000564846 CCDC195A0A1B0GUA6 201 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 LOC285095A0A1B0GVY8 99 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 UGT1A9O60656 530 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 EPOP01588 193 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 SERPINF2P08697 491 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 CES1P23141 567 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 ADRA1DP25100 572 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 MPP2Q14168 576 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 POU6F1Q14863 301 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 SLC5A9Q2M3M2 681 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 KDELC2Q7Z4H8 507 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 RBM23Q86U06 439 aaKnown RBP19.81■□□□□ 0.76
CLN6-205ENST00000564846 RASSF3Q86WH2 238 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 LMAN2LQ9H0V9 348 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 CCDC134Q9H6E4 229 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 UGT1A7Q9HAW7 530 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 UGT1A10Q9HAW8 530 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 UGT1A8Q9HAW9 530 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 TDP1Q9NUW8 608 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 PRKAG3Q9UGI9 489 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 VPS28Q9UK41 221 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 OR51B4Q9Y5P0 310 aa19.81■□□□□ 0.76
CLN6-205ENST00000564846 TYROBPO43914 113 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 ZMPSTE24O75844 475 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 CYBBP04839 570 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 ERVK-10P10266 1014 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 MZF1P28698 734 aaPredicted RBP19.8■□□□□ 0.76
CLN6-205ENST00000564846 PBX2P40425 430 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 NUMBP49757 651 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 SERPINH1P50454 418 aaKnown RBP19.8■□□□□ 0.76
CLN6-205ENST00000564846 ARF5P84085 180 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 IHHQ14623 411 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 SLC1A5Q15758 541 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 RNF43Q68DV7 783 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 GRASPQ7Z6J2 395 aaPredicted RBP19.8■□□□□ 0.76
CLN6-205ENST00000564846 ANKRD42Q8N9B4 389 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 USP13Q92995 863 aaPredicted RBP19.8■□□□□ 0.76
CLN6-205ENST00000564846 FEM1CQ96JP0 617 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 TXNDC16Q9P2K2 825 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 CCL26Q9Y258 94 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 TCAF1Q9Y4C2 921 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 GMNCA6NCL1 334 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 TRIM49D1C9J1S8 452 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 SPAG7O75391 227 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 NMBRP28336 390 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 CSKP41240 450 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 CHRNA4P43681 627 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 CYTH1Q15438 398 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 INO80DQ53TQ3 878 aaPredicted RBP19.8■□□□□ 0.76
CLN6-205ENST00000564846 ZNF697Q5TEC3 545 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 DCAF4L2Q8NA75 395 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 MGARPQ8TDB4 240 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 DYDC1Q8WWB3 177 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 ZNF707Q96C28 371 aaPredicted RBP19.8■□□□□ 0.76
CLN6-205ENST00000564846 IFT43Q96FT9 208 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 RANBP9Q96S59 729 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 TLE6Q9H808 572 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 ACTL7AQ9Y615 435 aa19.8■□□□□ 0.76
CLN6-205ENST00000564846 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.79■□□□□ 0.76
CLN6-205ENST00000564846 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.79■□□□□ 0.76
CLN6-205ENST00000564846 TTC24A2A3L6 582 aaPredicted RBP19.79■□□□□ 0.76
CLN6-205ENST00000564846 CR2P20023 1033 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 HLA-DPA1P20036 260 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 DNAJC3Q13217 504 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 FYB2Q5VWT5 728 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 PACS1Q6VY07 963 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 ZNF771Q7L3S4 317 aaPredicted RBP19.79■□□□□ 0.76
CLN6-205ENST00000564846 ADGRD2Q7Z7M1 963 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 KCNMB4Q86W47 210 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 SLC25A41Q8N5S1 370 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 BANPQ8N9N5 519 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 FIBINQ8TAL6 211 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 ALG14Q96F25 216 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 CPNE1Q99829 537 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 C2orf49Q9BVC5 232 aaPredicted RBP19.79■□□□□ 0.76
CLN6-205ENST00000564846 PBX4Q9BYU1 374 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 CERS4Q9HA82 394 aa19.79■□□□□ 0.76
CLN6-205ENST00000564846 C20orf96Q9NUD7 363 aaPredicted RBP19.79■□□□□ 0.76
CLN6-205ENST00000564846 KIAA1522Q9P206 1035 aaPredicted RBP19.79■□□□□ 0.76
CLN6-205ENST00000564846 HEATR9A2RTY3 570 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 INSIG1O15503 277 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 SNAP91O60641 907 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 TCF3P15923 654 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 PAMP19021 973 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 CA4P22748 312 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 GP5P40197 560 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 NTHL1P78549 312 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 SLC18A2Q05940 514 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 CDK18Q07002 472 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 LRRC14Q15048 493 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 DUSP6Q16828 381 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 GRTP1Q5TC63 336 aa19.78■□□□□ 0.76
CLN6-205ENST00000564846 PDPK2PQ6A1A2 396 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms