RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TXNDC16Q9P2K2 825 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 PRKAG3Q9UGI9 489 aa15.77■□□□□ 0.12
COMMD4-210ENST00000564587 ARIH1Q9Y4X5 557 aaPredicted RBP15.77■□□□□ 0.12
COMMD4-210ENST00000564587 GBF1Q92538 1859 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-210ENST00000564587 LOC285095A0A1B0GVY8 99 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 HEATR9A2RTY3 570 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 SLC9A3R1O14745 358 aaPredicted RBP15.76■□□□□ 0.11
COMMD4-210ENST00000564587 MOSPD3O75425 235 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 CCR2P41597 374 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 SERPINH1P50454 418 aaKnown RBP15.76■□□□□ 0.11
COMMD4-210ENST00000564587 SGSHP51688 502 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 CRADDP78560 199 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 ZXDBP98169 803 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 DSC2Q02487 901 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 SLC20A2Q08357 652 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 NSUN2Q08J23 767 aaKnown RBP eCLIP15.76■□□□□ 0.11
COMMD4-210ENST00000564587 NIPAL4Q0D2K0 466 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 ILF2Q12905 390 aaKnown RBP15.76■□□□□ 0.11
COMMD4-210ENST00000564587 DUSP6Q16828 381 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 CERCAMQ5T4B2 595 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 FYB2Q5VWT5 728 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 PDPK2PQ6A1A2 396 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 DENND5AQ6IQ26 1287 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 RETSATQ6NUM9 610 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 BBS7Q8IWZ6 715 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 FIBINQ8TAL6 211 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 PEX13Q92968 403 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 IFT43Q96FT9 208 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 CPNE1Q99829 537 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 APOL2Q9BQE5 337 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 FEM1AQ9BSK4 669 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 CCDC134Q9H6E4 229 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 PIDD1Q9HB75 910 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 PPANQ9NQ55 473 aaKnown RBP15.76■□□□□ 0.11
COMMD4-210ENST00000564587 TDP1Q9NUW8 608 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 DZANK1Q9NVP4 752 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 HCFC1R1Q9NWW0 138 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 ZFATQ9P243 1243 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 VPS28Q9UK41 221 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 YBX2Q9Y2T7 364 aaKnown RBP15.76■□□□□ 0.11
COMMD4-210ENST00000564587 HCFC2Q9Y5Z7 792 aa15.76■□□□□ 0.11
COMMD4-210ENST00000564587 CCDC195A0A1B0GUA6 201 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 CBX4O00257 560 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 CSPG5O95196 566 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 ZWINTO95229 277 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 PAPSS2O95340 614 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-210ENST00000564587 FGF1P05230 155 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 MMP2P08253 660 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 ALADP13716 330 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 GJA1P17302 382 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 CA4P22748 312 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 PLK1P53350 603 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 MAXP61244 160 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 CDK18Q07002 472 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 GRTP1Q5TC63 336 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 FAM109BQ6ICB4 259 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-210ENST00000564587 TRMT10BQ6PF06 316 aaKnown RBP15.75■□□□□ 0.11
COMMD4-210ENST00000564587 TIFABQ6ZNK6 161 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 RASSF3Q86WH2 238 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 PGBD5Q8N414 524 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 OR52K2Q8NGK3 314 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 MZB1Q8WU39 189 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 DYDC1Q8WWB3 177 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 USP13Q92995 863 aaPredicted RBP15.75■□□□□ 0.11
COMMD4-210ENST00000564587 NUDCD1Q96RS6 583 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 EPN3Q9H201 632 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 SFXN1Q9H9B4 322 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 PIH1D1Q9NWS0 290 aaKnown RBP15.75■□□□□ 0.11
COMMD4-210ENST00000564587 MRPS23Q9Y3D9 190 aaKnown RBP15.75■□□□□ 0.11
COMMD4-210ENST00000564587 TCAF1Q9Y4C2 921 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 OR51B4Q9Y5P0 310 aa15.75■□□□□ 0.11
COMMD4-210ENST00000564587 RANBP2P49792 3224 aaKnown RBP15.75■□□□□ 0.11
COMMD4-210ENST00000564587 MIA3Q5JRA6 1907 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 ZCWPW2A0A1B0GU75 182 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 CXorf49A8MYA2 514 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-210ENST00000564587 TM9SF1O15321 606 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 INSIG1O15503 277 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 ZMPSTE24O75844 475 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 TPH1P17752 444 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 GP5P40197 560 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 HADHAP40939 763 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 CSE1LP55060 971 aaKnown RBP15.74■□□□□ 0.11
COMMD4-210ENST00000564587 SLC18A2Q05940 514 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 OLIG2Q13516 323 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 SLC1A5Q15758 541 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 SEPT7Q16181 437 aaKnown RBP15.74■□□□□ 0.11
COMMD4-210ENST00000564587 PCSK7Q16549 785 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 UGP2Q16851 508 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 STXBP5Q5T5C0 1151 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 PPP2R2DQ66LE6 453 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 GRASPQ7Z6J2 395 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-210ENST00000564587 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.74■□□□□ 0.11
COMMD4-210ENST00000564587 MDM1Q8TC05 714 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 ACMSDQ8TDX5 336 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 SMG7Q92540 1137 aaKnown RBP15.74■□□□□ 0.11
COMMD4-210ENST00000564587 ZNF707Q96C28 371 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-210ENST00000564587 TCEAL4Q96EI5 215 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 SCUBE2Q9NQ36 999 aa15.74■□□□□ 0.11
COMMD4-210ENST00000564587 SMYD2Q9NRG4 433 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms