RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 DPYDQ12882 1025 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 MAPK7Q13164 816 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 DNASE1L3Q13609 305 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 HLTFQ14527 1009 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 Q6ZS92 163 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 C1orf127Q8N9H9 656 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 BICD1Q96G01 975 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 MSTO1Q9BUK6 570 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 B3GNT5Q9BYG0 378 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 SLC17A9Q9BYT1 436 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 EDEM3Q9BZQ6 932 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 LIME1Q9H400 295 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 APMAPQ9HDC9 416 aa10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 INTS6Q9UL03 887 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-204ENST00000563790 KLF18A0A0U1RQI7 1052 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 FPGTO14772 594 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 IGFBP2P18065 325 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 CD1CP29017 333 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 PTGIRP43119 386 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 BLKP51451 505 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 OR1D5P58170 312 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 PPARDQ03181 441 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 NECTIN1Q15223 517 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 VWA5B1Q5TIE3 1220 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 SCARA3Q6AZY7 606 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 GALNT17Q6IS24 598 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 C6orf15Q6UXA7 325 aaPredicted RBP10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 KLF6Q99612 283 aaPredicted RBP10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 BHMT2Q9H2M3 363 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 ACTL8Q9H568 366 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 OCEL1Q9H607 264 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 NMUR1Q9HB89 426 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 DMAP1Q9NPF5 467 aaPredicted RBP10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 AJAP1Q9UKB5 411 aaPredicted RBP10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 NME7Q9Y5B8 376 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 MPDZO75970 2070 aa10.87□□□□□ -0.67
HDGFL3-204ENST00000563790 TRGV8A0A0C4DH27 118 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 A0A1W2PQJ5 194 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 C1QTNF3-AMACRE9PGA6 284 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 SLC27A2O14975 620 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 HNRNPDLO14979 420 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 JRKO75564 520 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 PCDH8O95206 1070 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 KIF20AO95235 890 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 PAK4O96013 591 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 HMBSP08397 361 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 OR52Z1P0C646 297 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 RPA1P27694 616 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 CTSOP43234 321 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 ACOT2P49753 483 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 LIG4P49917 911 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 SMSP52788 366 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 POU5F1Q01860 360 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 NR1D2Q14995 579 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 ARSHQ5FYA8 562 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 MACC1Q6ZN28 852 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 TADA2BQ86TJ2 420 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 ZNF557Q8N988 423 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 RUFY2Q8WXA3 655 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 OR8D1Q8WZ84 308 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 LENG8Q96PV6 779 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 TRAPPC9Q96Q05 1148 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 TRPS1Q9UHF7 1281 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 MAPK8IP1Q9UQF2 711 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 SCML2Q9UQR0 700 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 PLEKHA6Q9Y2H5 1048 aa10.86□□□□□ -0.67
HDGFL3-204ENST00000563790 C21orf140B9A014 251 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 ZNF185O15231 689 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 PIGRP01833 764 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 PLA2G4BP0C869 781 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 CA7P43166 264 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 HK3P52790 923 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 DGKQP52824 942 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 KCNK10P57789 538 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 OTUD4Q01804 1114 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 SQSTM1Q13501 440 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 NTRK3Q16288 839 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 CALCRLQ16602 461 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 NCCRP1Q6ZVX7 275 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 KRTAP1-3Q8IUG1 177 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 SFTPA2Q8IWL1 248 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 GALNT6Q8NCL4 622 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 DPYSL5Q9BPU6 564 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 ZNF559Q9BR84 538 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 ULBP3Q9BZM4 244 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 KCNG1Q9UIX4 513 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 EDARQ9UNE0 448 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 NUP210LQ5VU65 1888 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 BIRC6Q9NR09 4857 aa10.85□□□□□ -0.67
HDGFL3-204ENST00000563790 SPTBP11277 2137 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 A6NL46 340 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 FOXO6A8MYZ6 492 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ZW10O43264 779 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 CTSEP14091 401 aa10.84□□□□□ -0.67
HDGFL3-204ENST00000563790 ZNF28P17035 718 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms