RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 RHOBTB1O94844 696 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 AKR1A1P14550 325 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 TSPAN8P19075 237 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 PRDX6P30041 224 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 GABRB2P47870 512 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 CRYBB1P53674 252 aaPredicted RBP10.58□□□□□ -0.71
RNF40-204ENST00000563683 DLG2Q15700 870 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 RBBP7Q16576 425 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 CTXN3Q4LDR2 81 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 OLFML1Q6UWY5 402 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 TMEM110Q86TL2 294 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 ERI1Q8IV48 349 aaKnown RBP10.58□□□□□ -0.71
RNF40-204ENST00000563683 FNDC8Q8TC99 324 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 RAET1EQ8TD07 263 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 GLT1D1Q96MS3 346 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 RBM38Q9H0Z9 239 aaKnown RBP10.58□□□□□ -0.71
RNF40-204ENST00000563683 TMEM165Q9HC07 324 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 PTPRHQ9HD43 1115 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 CCDC167Q9P0B6 97 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 TMEM216Q9P0N5 145 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 ADAMTS5Q9UNA0 930 aa10.58□□□□□ -0.71
RNF40-204ENST00000563683 SMIM35A0A1B0GVV1 85 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 MSI1O43347 362 aaKnown RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 SIN3BO75182 1162 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 GCATO75600 419 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TPSB2P20231 275 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 CD52P31358 61 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 CLCNKBP51801 687 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 PRKAA1Q13131 559 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TPSAB1Q15661 275 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TIGD7Q6NT04 549 aaPredicted RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 NEPROQ6NW34 567 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 LRRC8BQ6P9F7 803 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 IYDQ6PHW0 289 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 SPATA22Q8NHS9 363 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 GPR152Q8TDT2 470 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 SLC35F5Q8WV83 523 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TUBGCP3Q96CW5 907 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 QKIQ96PU8 341 aaKnown RBP eCLIP10.58□□□□□ -0.72
RNF40-204ENST00000563683 TBL1YQ9BQ87 522 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 UTP6Q9NYH9 597 aaKnown RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 RRN3Q9NYV6 651 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 RSL24D1Q9UHA3 163 aaKnown RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 ITGB1BP2Q9UKP3 347 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 LOXHD1Q8IVV2 1947 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 IGKV6D-21A0A0A0MT36 114 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 FAM95CA0A1B0GW59 222 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TRPC5OSA6NMA1 111 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 CDH5P33151 784 aaPredicted RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 RAB15P59190 212 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 MAP2K5Q13163 448 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 PEX6Q13608 980 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 SETD3Q86TU7 594 aaPredicted RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 ATP6V0D2Q8N8Y2 350 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 MTG1Q9BT17 334 aaPredicted RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 SLC4A5Q9BY07 1137 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 MUC3BQ9H195 1237 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 PLGRKTQ9HBL7 147 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 APPL1Q9UKG1 709 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 CNTN6Q9UQ52 1028 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TRPV2Q9Y5S1 764 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 ERI2A8K979 691 aaKnown RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 DAB1O75553 588 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 CRTAMO95727 393 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 PIRTP0C851 137 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 GRIA4P48058 902 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 PSMD7P51665 324 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 GHRHRQ02643 423 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 PTK2BQ14289 1009 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 KCNJ11Q14654 390 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 ZRANB3Q5FWF4 1079 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 C6orf10Q5SRN2 563 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 HPS6Q86YV9 775 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TMEM86AQ8N2M4 240 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 METTL25Q8N6Q8 603 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 PQLC3Q8N755 202 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 ACMSDQ8TDX5 336 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TRPC4APQ8TEL6 797 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 ULK4Q96C45 1275 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 VAT1Q99536 393 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 TRPC7Q9HCX4 862 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 MRPL40Q9NQ50 206 aaKnown RBP10.58□□□□□ -0.72
RNF40-204ENST00000563683 CNGB3Q9NQW8 809 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 DNAJC28Q9NX36 388 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 DERAQ9Y315 318 aa10.58□□□□□ -0.72
RNF40-204ENST00000563683 SBF2Q86WG5 1849 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 CBFA2T3O75081 653 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 MT-CYBP00156 380 aaPredicted RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 FAM163BP0C2L3 166 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 SLC2A3P11169 496 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 CD97P48960 835 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 RENBPP51606 427 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 TBX4P57082 545 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 STX5Q13190 355 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 DPYSL2Q16555 572 aa10.57□□□□□ -0.72
RNF40-204ENST00000563683 PATL1Q86TB9 770 aaKnown RBP10.57□□□□□ -0.72
RNF40-204ENST00000563683 PCED1BQ96HM7 432 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms