RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 DPCR1Q3MIW9 517 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 SLC44A4Q53GD3 710 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF805Q5CZA5 627 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FAM26FQ5R3K3 315 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 SLC9C2Q5TAH2 1124 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 DEPDC1Q5TB30 811 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 TTC23LQ6PF05 361 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 NXPE4Q6UWF7 544 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 TMC5Q6UXY8 1006 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 SLC30A10Q6XR72 485 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 PIK3AP1Q6ZUJ8 805 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 STOX1Q6ZVD7 989 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 SZRD1Q7Z422 152 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 TMCO2Q7Z6W1 182 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ZAR1Q86SH2 424 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 GPR149Q86SP6 731 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ZNF554Q86TJ5 538 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 MOGAT3Q86VF5 341 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CCDC25Q86WR0 208 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 LSRQ86X29 649 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 METTL23Q86XA0 190 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 MAPKAPK5Q8IW41 473 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ZFPM1Q8IX07 1006 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ARHGAP18Q8N392 663 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ZCCHC7Q8N3Z6 543 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FBXL16Q8N461 479 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 LIX1Q8N485 282 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 BANPQ8N9N5 519 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 LRRN4CLQ8ND94 238 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 MCPH1Q8NEM0 835 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 OR13C2Q8NGS9 318 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 RAB3IL1Q8TBN0 382 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FANK1Q8TC84 345 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 LRRC8CQ8TDW0 803 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 HASPINQ8TF76 798 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 UBLCP1Q8WVY7 318 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ST8SIA4Q92187 359 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 VPS33AQ96AX1 596 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 AHCYL2Q96HN2 611 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 UHRF1Q96T88 793 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 CCM2Q9BSQ5 444 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 DSCC1Q9BVC3 393 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 SF3B5Q9BWJ5 86 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 KRTAP9-9Q9BYP9 154 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FTOQ9C0B1 505 aaKnown RBP eCLIP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 NRSN2Q9GZP1 204 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 BOLA2Q9H3K6 86 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 OPA3Q9H6K4 179 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 MRPL44Q9H9J2 332 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 TREM1Q9NP99 234 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 EIF2B3Q9NR50 452 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 INIPQ9NRY2 104 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 KLC4Q9NSK0 619 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 NRBP2Q9NSY0 501 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 AGPAT5Q9NUQ2 364 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 ARHGEF38Q9NXL2 777 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 IFNKQ9P0W0 207 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 PARP4Q9UKK3 1724 aaKnown RBP5.61□□□□□ -1.51
CAPN3-211ENST00000562199 AP4E1Q9UPM8 1137 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 FADS3Q9Y5Q0 445 aa5.61□□□□□ -1.51
CAPN3-211ENST00000562199 RGPD2P0DJD1 1756 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ARFGEF2Q9Y6D5 1785 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 MAP3K15Q6ZN16 1313 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 hCG_1809904A0A1W2PP81 198 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 A0A1W2PPE2 198 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 A0A1W2PQ67 120 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 A0A1W2PR64 198 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 A0A1W2PRV1 198 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 KPNA7A9QM74 516 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 DNALI1O14645 258 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ANGPT2O15123 496 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ZSCAN12O43309 604 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 GMFGO60234 142 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ECE2O60344 883 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 GCATO75600 419 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 LCA5LO95447 670 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SCGB1D1O95968 90 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 GAS8O95995 478 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CFBP00751 764 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CSTAP01040 98 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PF4P02776 101 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ANXA1P04083 346 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 IL6P05231 212 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CKMP06732 381 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 TPOP07202 933 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 INHBAP08476 426 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 GSTT2P0CG29 244 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 GSTT2BP0CG30 244 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ERVK-10P10266 1014 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 VCLP18206 1134 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 HMOX2P30519 316 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 SLC26A3P40879 764 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ASPAP45381 313 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 ALDH9A1P49189 494 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 CCR9P51686 369 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 P2RX3P56373 397 aa5.6□□□□□ -1.51
CAPN3-211ENST00000562199 TRA2AQ13595 282 aaKnown RBP eCLIP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 PUM1Q14671 1186 aaKnown RBP eCLIP5.6□□□□□ -1.51
CAPN3-211ENST00000562199 NFIXQ14938 502 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms