RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 HSDL1Q3SXM5 330 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 TMEM198Q66K66 360 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 PMF1Q6P1K2 205 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 PIWIL4Q7Z3Z4 852 aaKnown RBP18.87■□□□□ 0.61
BBS4-204ENST00000562084 TRIM50Q86XT4 487 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 LSMEM2Q8N112 164 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 TMEM151AQ8N4L1 468 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 KDM1BQ8NB78 822 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 ZUFSPQ96AP4 578 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 CASS4Q9NQ75 786 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 CACNA2D2Q9NY47 1150 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 B3GNT3Q9Y2A9 372 aa18.87■□□□□ 0.61
BBS4-204ENST00000562084 E2F8A0AVK6 867 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 SDHDO14521 159 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 OCM2P0CE71 109 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 OCMP0CE72 109 aaPredicted RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 TCN1P20061 433 aaPredicted RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 KPNA2P52292 529 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 SLC5A3P53794 718 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 NAGLUP54802 743 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 OSTNP61366 133 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 RBP5P82980 135 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 JADE1Q6IE81 842 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 HMBOX1Q6NT76 420 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 NIPAL1Q6NVV3 410 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 DCDC5Q6ZRR9 648 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 KCNMB4Q86W47 210 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 PDPRQ8NCN5 879 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 PNPT1Q8TCS8 783 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 CHPT1Q8WUD6 406 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 SLC35F5Q8WV83 523 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 PLEKHA8Q96JA3 519 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 LGMNQ99538 433 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 MPHOSPH6Q99547 160 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 HNRNPABQ99729 332 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 CIB1Q99828 191 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 SLC25A23Q9BV35 468 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 PAIP1Q9H074 479 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 ADAMTS10Q9H324 1103 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 RPF2Q9H7B2 306 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 CXorf21Q9HAI6 301 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 PFDN4Q9NQP4 134 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 TMEM181Q9P2C4 612 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 ZNF214Q9UL59 606 aaPredicted RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 FUOMA2VDF0 154 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 GIPC1O14908 333 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 NOL3O60936 208 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 CSPG5O95196 566 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 INHBBP09529 407 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 BCAP31P51572 246 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 ATXN3P54252 364 aaPredicted RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 HMGCS2P54868 508 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 OXCT1P55809 520 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 DNAJB13P59910 316 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 PRKCQQ04759 706 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 TGFBIQ15582 683 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 REP15Q6BDI9 236 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 LYSMD3Q7Z3D4 306 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 DHFR2Q86XF0 187 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 NT5DC4Q86YG4 428 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 ZNF567Q8N184 647 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 OR2T34Q8NGX1 318 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 OR2T3Q8NH03 318 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 TBC1D15Q8TC07 691 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 MS4A4AQ96JQ5 239 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 NPLQ9BXD5 320 aaPredicted RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 TEX13BQ9BXU2 312 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 RHOJQ9H4E5 214 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 NOL11Q9H8H0 719 aaKnown RBP18.86■□□□□ 0.61
BBS4-204ENST00000562084 TMEM165Q9HC07 324 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 NCKIPSDQ9NZQ3 722 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 SLC30A1Q9Y6M5 507 aa18.86■□□□□ 0.61
BBS4-204ENST00000562084 A0A0G2JLL6 359 aaPredicted RBP18.85■□□□□ 0.61
BBS4-204ENST00000562084 AQP12BA6NM10 295 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 KCNU1A8MYU2 1149 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 TARM1B6A8C7 271 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 C19orf81C9J6K1 198 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 TK2O00142 265 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 MFSD11O43934 449 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 SNAP91O60641 907 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 SRP72O76094 671 aaKnown RBP18.85■□□□□ 0.61
BBS4-204ENST00000562084 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
BBS4-204ENST00000562084 SBK3P0C264 359 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 GMPRP36959 345 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 ATP4BP51164 291 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 MPP1Q00013 466 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 GRSF1Q12849 480 aaKnown RBP eCLIP18.85■□□□□ 0.61
BBS4-204ENST00000562084 PAFAH1B3Q15102 231 aaKnown RBP18.85■□□□□ 0.61
BBS4-204ENST00000562084 UGP2Q16851 508 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 EEF1DP3Q658K8 133 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 CES3Q6UWW8 571 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 PRRT2Q7Z6L0 340 aaPredicted RBP18.85■□□□□ 0.61
BBS4-204ENST00000562084 AQP12AQ8IXF9 295 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 ZNF786Q8N393 782 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 FAM156AQ8NDB6 213 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 SLC35B4Q969S0 331 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 PPWD1Q96BP3 646 aaKnown RBP18.85■□□□□ 0.61
BBS4-204ENST00000562084 ROPN1LQ96C74 230 aa18.85■□□□□ 0.61
BBS4-204ENST00000562084 SCYL1Q96KG9 808 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms