RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 CNOT1A5YKK6 2376 aaKnown RBP15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 PCDH15Q96QU1 1955 aa15.51■□□□□ 0.07
SNRPA1-213ENST00000560856 DOCK9Q9BZ29 2069 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 FAM47DPA6NHR8 397 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 LRRC72A6NJI9 287 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 CDX4O14627 284 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 INSIG1O15503 277 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 PJA2O43164 708 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 LATO43561 262 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 MAFKO60675 156 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 FSBPO95073 299 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 COMTP21964 271 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 ITGB7P26010 798 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 CD27P26842 260 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 SLC1A1P43005 524 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 RGRP47804 291 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 CCR5P51681 352 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 LIMK1P53667 647 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 PPP2CBP62714 309 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 PPP2CAP67775 309 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 BNC1Q01954 994 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 RSPO4Q2I0M5 234 aaPredicted RBP15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 NCBP2-AS2Q69YL0 99 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 ERN2Q76MJ5 926 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 ZCCHC9Q8N567 271 aaKnown RBP15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 NETO1Q8TDF5 533 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 LRIG1Q96JA1 1093 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 NSMCE3Q96MG7 304 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 GDAP1L1Q96MZ0 367 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 CALN1Q9BXU9 219 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 ZDHHC6Q9H6R6 413 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 ALG6Q9Y672 507 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 DUSP10Q9Y6W6 482 aa15.5■□□□□ 0.07
SNRPA1-213ENST00000560856 ASCC3Q8N3C0 2202 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 A0A1B0GTW7 788 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 A0A1W2PPC4 97 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 BTNL10A8MVZ5 291 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 ZNF487B1APH4 448 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 TM4SF5O14894 197 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 MUSKO15146 869 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 BCAT2O15382 392 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 MFSD11O43934 449 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 CFIP05156 583 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 NOP2P46087 812 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 CSNK1DP48730 415 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 RHOAP61586 193 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 SLC10A2Q12908 348 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 RFTN1Q14699 578 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 AASDHQ4L235 1098 aaPredicted RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 PARS2Q7L3T8 475 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 RABEPKQ7Z6M1 372 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 MAP7D3Q8IWC1 876 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 TPCN2Q8NHX9 752 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 EXOC2Q96KP1 924 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 RNF157Q96PX1 679 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 EDEM2Q9BV94 578 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 CPEB1Q9BZB8 566 aaKnown RBP15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 SP110Q9HB58 689 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 SUSD2Q9UGT4 822 aa15.49■□□□□ 0.07
SNRPA1-213ENST00000560856 CABIN1Q9Y6J0 2220 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3DA0A087WVF3 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3IA0A087WXS9 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3EA0A087X179 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3KA0A087X1G2 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 A0A0U1RQJ8 604 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3FA6NER0 549 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3LB9A6J9 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 KRIT1O00522 736 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 SLC30A4O14863 429 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 WNT9AO14904 365 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 SPINT1O43278 529 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 PALMO75781 387 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 IGSF6O95976 241 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 UGT2B4P06133 528 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3HP0C7X1 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 GNSP15586 552 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 ENGP17813 658 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 SERPINB6P35237 376 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 ABL2P42684 1182 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 VAV2P52735 878 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 SLC10A7Q0GE19 358 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 GALNT2Q10471 571 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TAZQ16635 292 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 ZNF805Q5CZA5 627 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 STPG1Q5TH74 334 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3GQ6DHY5 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3CQ6IPX1 549 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 C11orf63Q6NUN7 778 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TRIM69Q86WT6 500 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 VSIG1Q86XK7 387 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 RHOT1Q8IXI2 618 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 TBC1D3Q8IZP1 549 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 RYBPQ8N488 228 aaPredicted RBP15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 SNX19Q92543 992 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 ZNF599Q96NL3 588 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 PSKH2Q96QS6 385 aa15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 NUSAP1Q9BXS6 441 aaKnown RBP15.48■□□□□ 0.07
SNRPA1-213ENST00000560856 MIR1-1HGQ9H1L0 117 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms