RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FAM124AQ86V42 546 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 FCRL2Q96LA5 508 aaPredicted RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ALG9Q9H6U8 611 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ARHGAP28Q9P2N2 729 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 AGO1Q9UL18 857 aaKnown RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 LOC102724159A0A0B4J2E5 919 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CCL16O15467 120 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 FASP25445 335 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 PWP2Q15269 919 aaKnown RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 FGD3Q5JSP0 725 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CERS2Q96G23 380 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ZSCAN5DPP0CG00 497 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 NFKB1P19838 968 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CES1P23141 567 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 PRKCIP41743 596 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 MSLNQ13421 630 aaPredicted RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 TYW3Q6IPR3 259 aaKnown RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 AFTPHQ6ULP2 937 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 UNC5AQ6ZN44 842 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ATAD3AQ9NVI7 634 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 CROTQ9UKG9 612 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 FEN1P39748 380 aaKnown RBP13.6□□□□□ -0.23
TRAF3-208ENST00000560371 ZBTB49Q6ZSB9 765 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 MTERF3Q96E29 417 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 TAS2R14Q9NYV8 317 aa13.6□□□□□ -0.23
TRAF3-208ENST00000560371 GCATO75600 419 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 C1RP00736 705 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 RPL7AP62424 266 aaKnown RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 FAAP100Q0VG06 881 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 FRG1Q14331 258 aaKnown RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 SLC25A52Q3SY17 297 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■■■■ 27
TRAF3-208ENST00000560371 EPS8L2Q9H6S3 715 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ISM1B1AKI9 464 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 KELP23276 732 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ADRA1DP25100 572 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 PTPRNQ16849 979 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 TMEM237Q96Q45 408 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 PLK2Q9NYY3 685 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 PCDHA2Q9Y5H9 948 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 CTPS1P17812 591 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 RXRGP48443 463 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 TRIM32Q13049 653 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 CERS4Q9HA82 394 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 GOLGA2P5Q9HBQ8 144 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ENOPH1Q9UHY7 261 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 INVSQ9Y283 1065 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 PTPRZ1P23471 2315 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 B4GALT4O60513 344 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 FAM228AQ86W67 206 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 C12orf50Q8NA57 414 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 C10orf88Q9H8K7 445 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 TBC1D23Q9NUY8 699 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 PPIEQ9UNP9 301 aaKnown RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 GSAPA4D1B5 854 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 MED1Q15648 1581 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 TBCELQ5QJ74 424 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 FLCNQ8NFG4 579 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 MRPL45Q9BRJ2 306 aaKnown RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ROGDIQ9GZN7 287 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 RPRD1BQ9NQG5 326 aaKnown RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ADPRHL2Q9NX46 363 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 DDX20Q9UHI6 824 aaKnown RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 TMCO1Q9UM00 188 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 MAPRE3Q9UPY8 281 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 PAGE1O75459 146 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 SLC41A1Q8IVJ1 513 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ANKRD7Q92527 254 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 SHC3Q92529 594 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 BTN2A3PQ96KV6 586 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-208ENST00000560371 MORF4L1Q9UBU8 362 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
TRAF3-208ENST00000560371 HIST1H2ABP04908 130 aa13.58□□□□□ -0.23
TRAF3-208ENST00000560371 HIST3H2AQ7L7L0 130 aa13.58□□□□□ -0.23
TRAF3-208ENST00000560371 SIX5Q8N196 739 aa13.58□□□□□ -0.23
TRAF3-208ENST00000560371 HIST1H2ACQ93077 130 aa13.58□□□□□ -0.23
TRAF3-208ENST00000560371 MKL2Q9ULH7 1088 aa13.58□□□□□ -0.23
TRAF3-208ENST00000560371 ASF1AQ9Y294 204 aa13.58□□□□□ -0.23
TRAF3-208ENST00000560371 TPP1O14773 563 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 UBTFL6P0CB48 400 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 COX7A2P14406 83 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 JAK1P23458 1154 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 IRX1P78414 480 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 CASP12Q6UXS9 341 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 FBXO6Q9NRD1 293 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 CFAP97Q9P2B7 532 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 ITGAVP06756 1048 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 VAV1P15498 845 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms