RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IL12RB1P42701 662 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 NUMBP49757 651 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 GFPT1Q06210 699 aaPredicted RBP7.62□□□□□ -1.19
SPG11-213ENST00000558988 CETN1Q12798 172 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 CAMK4Q16566 473 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 ST3GAL2Q16842 350 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 FUT11Q495W5 492 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 FNDC3BQ53EP0 1204 aaKnown RBP7.62□□□□□ -1.19
SPG11-213ENST00000558988 RAB41Q5JT25 222 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 RFWD3Q6PCD5 774 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 SERPINA13PQ6UXR4 307 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 SLC36A4Q6YBV0 504 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 ANKS1BQ7Z6G8 1248 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 ZNF761Q86XN6 746 aaPredicted RBP7.62□□□□□ -1.19
SPG11-213ENST00000558988 GOLGA1Q92805 767 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 FAM149B1Q96BN6 582 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 MRGPRX1Q96LB2 322 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 GABRG3Q99928 467 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 CRACR2AQ9BSW2 395 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 SRRTQ9BXP5 876 aaKnown RBP7.62□□□□□ -1.19
SPG11-213ENST00000558988 PRDM16Q9HAZ2 1276 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 OLA1Q9NTK5 396 aaKnown RBP7.62□□□□□ -1.19
SPG11-213ENST00000558988 ACSL6Q9UKU0 697 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 ANGPTL2Q9UKU9 493 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 COQ4Q9Y3A0 265 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.62□□□□□ -1.19
SPG11-213ENST00000558988 MYO15AQ9UKN7 3530 aa7.62□□□□□ -1.19
SPG11-213ENST00000558988 TPRP12270 2363 aaKnown RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 SYNJ2BP-COX16A0A087WUM0 186 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 SPAARA0A1B0GVQ0 90 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 BICDL2A1A5D9 508 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 CDX4O14627 284 aaPredicted RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 TBL1XO60907 577 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 ZNF217O75362 1048 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 MOCS2O96007 188 aaPredicted RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 SYPP08247 313 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 PAEPP09466 180 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 SETSIPP0DME0 302 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 ACADMP11310 421 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 SGSHP51688 502 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 DAOAP59103 153 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 LMAN2Q12907 356 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 PAK1Q13153 545 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 ZNF234Q14588 700 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 NR1I3Q14994 352 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 SMN1Q16637 294 aaKnown RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 PLEKHG6Q3KR16 790 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 MPPE1Q53F39 396 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 COBLL1Q53SF7 1204 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 TTI2Q6NXR4 508 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 PMF1Q6P1K2 205 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 CHST9Q7L1S5 443 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 BHLHA9Q7RTU4 235 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 TMPRSS6Q8IU80 811 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 SLC41A1Q8IVJ1 513 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 ZC3H3Q8IXZ2 948 aaKnown RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 HDDC3Q8N4P3 179 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 PRCCQ92733 491 aaPredicted RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 TMA16Q96EY4 203 aaKnown RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 TOE1Q96GM8 510 aaKnown RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 FCRL2Q96LA5 508 aaPredicted RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 TIGD1Q96MW7 591 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 ZSWIM1Q9BR11 485 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 GPR174Q9BXC1 333 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 GTPBP4Q9BZE4 634 aaKnown RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 INTS2Q9H0H0 1204 aaKnown RBP7.61□□□□□ -1.19
SPG11-213ENST00000558988 CNGB3Q9NQW8 809 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 ABCB8Q9NUT2 735 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 ELOVL2Q9NXB9 296 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 COX16Q9P0S2 106 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 PILRBQ9UKJ0 227 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPG11-213ENST00000558988 PI4KAP42356 2102 aa7.61□□□□□ -1.19
SPG11-213ENST00000558988 DMXL1Q9Y485 3027 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 TNRC6BQ9UPQ9 1833 aaKnown RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 CAPN9O14815 690 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 THAP12O43422 761 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 LETM1O95202 739 aaPredicted RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 TOP3BO95985 862 aaKnown RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 AFPP02771 609 aaKnown RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 LTFP02788 710 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 NCAM1P13591 858 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 HOXD9P28356 352 aaPredicted RBP7.6□□□□□ -1.19
SPG11-213ENST00000558988 PMLP29590 882 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 CD6P30203 668 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 PPP1R2P41236 205 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 SLC11A2P49281 568 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 TBX4P57082 545 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 APBA1Q02410 837 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 MORC3Q14149 939 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 ARHGAP44Q17R89 818 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 DUOXA1Q1HG43 343 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 SYCP2LQ5T4T6 812 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 TMEM215Q68D42 235 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 PM20D1Q6GTS8 502 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 DENND1BQ6P3S1 775 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 GJB7Q6PEY0 223 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 LCLAT1Q6UWP7 414 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 SLCO6A1Q86UG4 719 aa7.6□□□□□ -1.19
SPG11-213ENST00000558988 CPXM2Q8N436 756 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms