RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 PRAMEF11O60813 436 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 TMCC1O94876 653 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 FSBPO95073 299 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 IGSF6O95976 241 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 CTSLP07711 333 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 SERPINF2P08697 491 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 DRD3P35462 400 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 GJC1P36383 396 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 ARSEP51690 589 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 LIMK1P53667 647 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 ADPRHP54922 357 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 HADHBP55084 474 aaKnown RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 TAS2R40P59535 323 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 RHOAP61586 193 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 IL10RBQ08334 325 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 RFTN1Q14699 578 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 KIAA0895LQ68EN5 471 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 NCEH1Q6PIU2 408 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 LEKR1Q6ZMV7 388 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 ARHGAP12Q8IWW6 846 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 SPC24Q8NBT2 197 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 CHST14Q8NCH0 376 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 GRIN3AQ8TCU5 1115 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 SNX19Q92543 992 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 GDAP1L1Q96MZ0 367 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 BAG1Q99933 345 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 CALN1Q9BXU9 219 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 OSBPL1AQ9BXW6 950 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 MIR1-1HGQ9H1L0 117 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 SMOC1Q9H4F8 434 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 ZDHHC6Q9H6R6 413 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 PDFQ9HBH1 243 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 CDV3Q9UKY7 258 aaKnown RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-211ENST00000557623 WASF2Q9Y6W5 498 aa12.7□□□□□ -0.38
SLIRP-211ENST00000557623 GPR179Q6PRD1 2367 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3DA0A087WVF3 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3IA0A087WXS9 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3EA0A087X179 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3KA0A087X1G2 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3FA6NER0 549 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3LB9A6J9 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 BCAT2O15382 392 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 PLRG1O43660 514 aaKnown RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 LEFTY1O75610 366 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 CFIP05156 583 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 SYPP08247 313 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3HP0C7X1 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 ITGB7P26010 798 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 MAOBP27338 520 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 CCR5P51681 352 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 IRX4P78413 519 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 CNTN1Q12860 1018 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 POM121L1PQ3SYA9 428 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 ODF2Q5BJF6 829 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TMCO4Q5TGY1 634 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 LRRC38Q5VT99 294 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 AGBL4Q5VU57 503 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3GQ6DHY5 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3CQ6IPX1 549 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 ERN2Q76MJ5 926 aaKnown RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 LRRC49Q8IUZ0 686 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TBC1D3Q8IZP1 549 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 TXLNBQ8N3L3 684 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 NPWQ8N729 165 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 BIRC7Q96CA5 298 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 HDAC8Q9BY41 377 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 EIF2B4Q9UI10 523 aaKnown RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 IPO11Q9UI26 975 aaKnown RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 EP300Q09472 2414 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-211ENST00000557623 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
SLIRP-211ENST00000557623 DOCK9Q9BZ29 2069 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 GON4LQ3T8J9 2241 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 ZNF487B1APH4 448 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 J3KR12 359 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 KRIT1O00522 736 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 SPOPO43791 374 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 PALMO75781 387 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 CD48P09326 243 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 KDELR1P24390 212 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 IL4RP24394 825 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 CD27P26842 260 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 NUDT1P36639 197 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 NEK3P51956 506 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 METAP1P53582 386 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 GSDMDP57764 484 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 GRM3Q14832 879 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 CYTH1Q15438 398 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 RSPO4Q2I0M5 234 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-211ENST00000557623 ATP13A4Q4VNC1 1196 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 ANKRD20A8PQ5CZ79 823 aa12.68□□□□□ -0.38
SLIRP-211ENST00000557623 PIP5KL1Q5T9C9 394 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms