RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 PABPC3Q9H361 631 aaKnown RBP7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 SNX25Q9H3E2 840 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 FAM204AQ9H8W3 233 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 PRSS16Q9NQE7 514 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 TLR8Q9NR97 1041 aaKnown RBP7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 LATS2Q9NRM7 1088 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 FBXL12Q9NXK8 326 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 SEPT10Q9P0V9 454 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 NAGPAQ9UK23 515 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 ODF2LQ9ULJ1 636 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 HPCAL4Q9UM19 191 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 ZNF510Q9Y2H8 683 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 ENTPD2Q9Y5L3 495 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 STYXL1Q9Y6J8 313 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 PDZD2O15018 2839 aa7.04□□□□□ -1.28
SPTLC2-206ENST00000557566 RP1P56715 2156 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 ATP8B3O60423 1300 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 CCDC187A0A096LP49 1063 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 NPHP3-ACAD11A0A0J9YXS1 232 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 PP2D1A8MPX8 630 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TISP43B9A030 160 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 GOLGA8KD6RF30 607 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 GNB5O14775 395 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TCEA3O75764 348 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 RNASEH2AO75792 299 aaKnown RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 SYF2O95926 243 aaKnown RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TBX18O95935 607 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TMEM191BP0C7N4 346 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 PRLRP16471 622 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 PTPN1P18031 435 aaKnown RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TGM2P21980 687 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 DGKAP23743 735 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 GNL1P36915 607 aaPredicted RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 HARS2P49590 506 aaKnown RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 SLC12A3P55017 1021 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 GTF2BQ00403 316 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 APBA1Q02410 837 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 CLCA4Q14CN2 919 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TTC38Q5R3I4 469 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 MANEAQ5SRI9 462 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TMEM215Q68D42 235 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 NXPE4Q6UWF7 544 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 RBM44Q6ZP01 1051 aaKnown RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 BRSK2Q8IWQ3 736 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TMEM102Q8N9M5 508 aaPredicted RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 FAM76AQ8TAV0 307 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 IFI44Q8TCB0 444 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 WFIKKN2Q8TEU8 576 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 CYB5D2Q8WUJ1 264 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 P2RY11Q96G91 374 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 HPDLQ96IR7 371 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 APOLD1Q96LR9 279 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 MED15Q96RN5 788 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 KCNK16Q96T55 309 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 OMDQ99983 421 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 DESI2Q9BSY9 194 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 MTMR12Q9C0I1 747 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 RSPH9Q9H1X1 276 aaPredicted RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 FBXO44Q9H4M3 255 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 ZNF768Q9H5H4 540 aaKnown RBP7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 PARVGQ9HBI0 331 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 NLGN3Q9NZ94 848 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 IL37Q9NZH6 218 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 FRRS1LQ9P0K9 344 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 VTI1BQ9UEU0 232 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 SUN2Q9UH99 717 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 SIX4Q9UIU6 781 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 TUBD1Q9UJT1 453 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 FZD4Q9ULV1 537 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 PLAAQ9Y263 795 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 PCDHGA7Q9Y5G6 932 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 DOCK9Q9BZ29 2069 aa7.03□□□□□ -1.28
SPTLC2-206ENST00000557566 NYNRINQ9P2P1 1898 aaKnown RBP7.02□□□□□ -1.28
SPTLC2-206ENST00000557566 PRRC2CQ9Y520 2896 aaKnown RBP7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 PMS2P1A4D2B8 440 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 NEMP2A6NFY4 417 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 LRRIQ3A6PVS8 624 aaPredicted RBP7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 CLDN5O00501 218 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 EBAG9O00559 213 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 KIF1CO43896 1103 aaKnown RBP7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 NOBOXO60393 691 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 RNASEH1O60930 286 aaKnown RBP7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 STC2O76061 302 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 GYPCP04921 128 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 PLA2G4BP0C869 781 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 LIPCP11150 499 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 SLC5A2P31639 672 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 NUDT1P36639 197 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 CD97P48960 835 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 OXCT1P55809 520 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 KRT83P78385 493 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 CDK17Q00537 523 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 SRSF6Q13247 344 aaKnown RBP7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 KCNAB2Q13303 367 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 STIM1Q13586 685 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 STAT4Q14765 748 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 TGIF1Q15583 401 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 TSNAXIP1Q2TAA8 658 aa7.02□□□□□ -1.29
SPTLC2-206ENST00000557566 PERM1Q5SV97 790 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms