RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 FAM20CQ8IXL6 584 aa8.45□□□□□ -1.06
CHD8-213ENST00000557364 ZNF607Q96SK3 696 aa8.45□□□□□ -1.06
CHD8-213ENST00000557364 KCNS3Q9BQ31 491 aa8.45□□□□□ -1.06
CHD8-213ENST00000557364 C11orf49Q9H6J7 331 aa8.45□□□□□ -1.06
CHD8-213ENST00000557364 DIABLOQ9NR28 239 aa8.45□□□□□ -1.06
CHD8-213ENST00000557364 CLIC5Q9NZA1 410 aa8.45□□□□□ -1.06
CHD8-213ENST00000557364 LZTS1Q9Y250 596 aa8.45□□□□□ -1.06
CHD8-213ENST00000557364 COL6A1P12109 1028 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 IDSP22304 550 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 VHLP40337 213 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 NEK3P51956 506 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PDX1P52945 283 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TTC23Q5W5X9 447 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PAPD7Q5XG87 772 aaKnown RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 OTOP3Q7RTS5 596 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SAMD14Q8IZD0 417 aaPredicted RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 KAT2BQ92831 832 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 RNFT2Q96EX2 444 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TCF25Q9BQ70 676 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CAAP1Q9H8G2 361 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 DDX28Q9NUL7 540 aaKnown RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 MED1Q15648 1581 aaPredicted RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 KNDC1Q76NI1 1749 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 B4GALT4O60513 344 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 KLHL41O60662 606 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 VAPBO95292 243 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CCZ1BP86790 482 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CCZ1P86791 482 aaPredicted RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 GAD2Q05329 585 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TRIM40Q6P9F5 258 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TRAPPC12Q8WVT3 735 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SELENOMQ8WWX9 145 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SYT17Q9BSW7 474 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PRRG4Q9BZD6 226 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TRPS1Q9UHF7 1281 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 ZNF214Q9UL59 606 aaPredicted RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 IRGMA1A4Y4 181 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 VSTM5A8MXK1 200 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 GLRBP48167 497 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 DSG1Q02413 1049 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 C9orf57Q5W0N0 161 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 C16orf59Q7L2K0 433 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 ADHFE1Q8IWW8 467 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 MCEMP1Q8IX19 187 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 HDDC3Q8N4P3 179 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 LHX5Q9H2C1 402 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PHTF1Q9UMS5 762 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TPRKBQ9Y3C4 175 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 A0A096LPK6 155 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 C1orf232A0A0U1RR37 186 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 ABHD14A-ACY1A0A1B0GW23 586 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 GTPBP1O00178 669 aaKnown RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 CLDN4O14493 209 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 BAIAP3O94812 1187 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PDHA1P08559 390 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 KDM7AQ6ZMT4 941 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 RFX8Q6ZV50 586 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 C12orf56Q8IXR9 622 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SPPL2AQ8TCT8 520 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 ACDQ96AP0 544 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 RAB11FIP5Q9BXF6 653 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SMURF2Q9HAU4 748 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CYP4F12Q9HCS2 524 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 GGT7Q9UJ14 662 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 INSL6Q9Y581 213 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 FGRP09769 529 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 AMPD1P23109 780 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 KDELR1P24390 212 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 AKT2P31751 481 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 ICAM3P32942 547 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SERPINB5P36952 375 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 RAB14P61106 215 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 FSTL1Q12841 308 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 ILF3Q12906 894 aaKnown RBP eCLIP8.44□□□□□ -1.062e-6■■■■□ 21.6
CHD8-213ENST00000557364 KCNA10Q16322 511 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 RAD9BQ6WBX8 426 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 UPF1Q92900 1129 aaKnown RBP eCLIP8.44□□□□□ -1.06
CHD8-213ENST00000557364 SLC38A2Q96QD8 506 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 APOL2Q9BQE5 337 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 AIF1LQ9BQI0 150 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 LMAN2LQ9H0V9 348 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CDT1Q9H211 546 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SERHL2Q9H4I8 314 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SERHLQ9NQF3 203 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 MTRRQ9UBK8 725 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CORO1CQ9ULV4 474 aaPredicted RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 ZDHHC9Q9Y397 364 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 SLC1A6P48664 564 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 MRPS35P82673 323 aaKnown RBP8.44□□□□□ -1.06
CHD8-213ENST00000557364 FAAH2Q6GMR7 532 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CYP4X1Q8N118 509 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 CD99L2Q8TCZ2 262 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TRPM4Q8TD43 1214 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 TATDN2Q93075 761 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 HCN3Q9P1Z3 774 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PDP2Q9P2J9 529 aa8.44□□□□□ -1.06
CHD8-213ENST00000557364 PNMA8CA0A1B0GUJ8 204 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms