RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PMS2P11Q13670 270 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 SLC35G1Q2M3R5 365 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 TWISTNBQ3B726 338 aaPredicted RBP4.25□□□□□ -1.73
CHD8-212ENST00000557329 TMEM196Q5HYL7 178 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 GORABQ5T7V8 394 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 DGLUCYQ7Z3D6 616 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 ANKRD33Q7Z3H0 272 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 GATAD2AQ86YP4 633 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 SYTL1Q8IYJ3 562 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 FAM47BQ8NA70 645 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 SCARB1Q8WTV0 552 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 AKAP1Q92667 903 aaKnown RBP eCLIP4.25□□□□□ -1.73
CHD8-212ENST00000557329 COQ8BQ96D53 544 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 FCRL4Q96PJ5 515 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 SIGLEC11Q96RL6 698 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 TRMOQ9BU70 441 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 QTRT1Q9BXR0 403 aaKnown RBP4.25□□□□□ -1.73
CHD8-212ENST00000557329 IDI2Q9BXS1 227 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 MOV10L1Q9BXT6 1211 aaKnown RBP4.25□□□□□ -1.73
CHD8-212ENST00000557329 VPS16Q9H269 839 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 RPAP3Q9H6T3 665 aaPredicted RBP4.25□□□□□ -1.73
CHD8-212ENST00000557329 ABHD10Q9NUJ1 306 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 LPAR3Q9UBY5 353 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 IPO11Q9UI26 975 aaKnown RBP4.25□□□□□ -1.73
CHD8-212ENST00000557329 RALYQ9UKM9 306 aaKnown RBP4.25□□□□□ -1.73
CHD8-212ENST00000557329 ZMYM2Q9UBW7 1377 aa4.25□□□□□ -1.73
CHD8-212ENST00000557329 UMODL1Q5DID0 1318 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 DOCK1Q14185 1865 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 USP34Q70CQ2 3546 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 FRMPD3Q5JV73 1810 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 PHIPQ8WWQ0 1821 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 PNMA6EA0A0J9YXQ4 647 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 FAM234BA2RU67 622 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 GOLGA6L3A6NEY3 463 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 TMEM221A6NGB7 291 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 C3orf70A6NLC5 250 aaPredicted RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 M0R296 226 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 SOCS2O14508 198 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 PRPF4O43172 522 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD8-212ENST00000557329 CNOT3O75175 753 aaKnown RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 BMP15O95972 392 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 LDHCP07864 332 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 HARSP12081 509 aaKnown RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 HSPA7P48741 367 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 ALDH18A1P54886 795 aaKnown RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 BEX3Q00994 111 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 STIM1Q13586 685 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 KCTD2Q14681 263 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 LEXMQ3ZCV2 418 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 C10orf25Q5T742 122 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 GRHL2Q6ISB3 625 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 TMEM88Q6PEY1 159 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 ASCL5Q7RTU5 278 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 TMCO2Q7Z6W1 182 aaPredicted RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 ANKRD13BQ86YJ7 626 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 ADSSL1Q8N142 457 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 GLIS1Q8NBF1 620 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 TMEM41AQ96HV5 264 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 ZNF845Q96IR2 970 aaPredicted RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 SGCZQ96LD1 299 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 TUBB6Q9BUF5 446 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 SPATC1LQ9H0A9 340 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 TRPV6Q9H1D0 765 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 BICC1Q9H694 974 aaKnown RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 HOXC10Q9NYD6 342 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 TBX21Q9UL17 535 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 LRCH1Q9Y2L9 728 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 HEMK1Q9Y5R4 338 aaPredicted RBP4.24□□□□□ -1.73
CHD8-212ENST00000557329 GBF1Q92538 1859 aa4.24□□□□□ -1.73
CHD8-212ENST00000557329 SYNRGQ9UMZ2 1314 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 DOCK2Q92608 1830 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 PTPRFP10586 1907 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 SMCHD1A6NHR9 2005 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 MED19A0JLT2 244 aaPredicted RBP4.23□□□□□ -1.73
CHD8-212ENST00000557329 GXYLT2A0PJZ3 443 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 CTIFO43310 598 aaKnown RBP4.23□□□□□ -1.73
CHD8-212ENST00000557329 PRAMEF2O60811 474 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 FLOT1O75955 427 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 NDST3O95803 873 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 MYL3P08590 195 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 HOXC6P09630 235 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 CTSAP10619 480 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 RPS6KB1P23443 525 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 PSMC6P62333 389 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 GSTO1P78417 241 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 MECOMQ03112 1051 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 SRSF1Q07955 248 aaKnown RBP eCLIP4.23□□□□□ -1.73
CHD8-212ENST00000557329 SLC14A1Q13336 389 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 COG2Q14746 738 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 MPEG1Q2M385 716 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 P3H1Q32P28 736 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 RAP1GAP2Q684P5 730 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 WDR93Q6P2C0 686 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 PGBD2Q6P3X8 592 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 CXCL17Q6UXB2 119 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 ATF7IPQ6VMQ6 1270 aa4.23□□□□□ -1.73
CHD8-212ENST00000557329 SRLQ86TD4 932 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms