RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 ELOCQ15369 112 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 PRR30Q53SZ7 412 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-220ENST00000557037 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 CXorf57Q6NSI4 855 aaKnown RBP12.75□□□□□ -0.37
PSEN1-220ENST00000557037 LVRNQ6Q4G3 990 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 VPS36Q86VN1 386 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 TNRC6AQ8NDV7 1962 aaKnown RBP12.75□□□□□ -0.37
PSEN1-220ENST00000557037 OR6C4Q8NGE1 309 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 OR52K2Q8NGK3 314 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 STARD8Q92502 1023 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 TSACCQ96A04 125 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-220ENST00000557037 ZSCAN31Q96LW9 406 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-220ENST00000557037 LENG8Q96PV6 779 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-220ENST00000557037 HAPLN3Q96S86 360 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 C1QTNF2Q9BXJ5 285 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 IMPG2Q9BZV3 1241 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 KCND3Q9UK17 655 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 APPL1Q9UKG1 709 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 ITGB1BP2Q9UKP3 347 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 FADS3Q9Y5Q0 445 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 TACC2O95359 2948 aa12.75□□□□□ -0.37
PSEN1-220ENST00000557037 HNRNPRO43390 633 aaKnown RBP12.74□□□□□ -0.37
PSEN1-220ENST00000557037 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 SRCP12931 536 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 ADRB3P13945 408 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 EIF4A3P38919 411 aaKnown RBP12.74□□□□□ -0.37
PSEN1-220ENST00000557037 RGS7P49802 495 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 NEK3P51956 506 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
PSEN1-220ENST00000557037 ARHGEF7Q14155 803 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 C1orf220Q5T0J3 134 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 CERCAMQ5T4B2 595 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 MACC1Q6ZN28 852 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 TIPARPQ7Z3E1 657 aaKnown RBP12.74□□□□□ -0.37
PSEN1-220ENST00000557037 GKN2Q86XP6 184 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 C12orf56Q8IXR9 622 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 PDILTQ8N807 584 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 ATP11CQ8NB49 1132 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 DQX1Q8TE96 717 aaKnown RBP12.74□□□□□ -0.37
PSEN1-220ENST00000557037 ALG14Q96F25 216 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 FEM1AQ9BSK4 669 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 EDEM3Q9BZQ6 932 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 TNKS2Q9H2K2 1166 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 SLC39A1Q9NY26 324 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 VPS28Q9UK41 221 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 TLK1Q9UKI8 766 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 TSPAN16Q9UKR8 245 aa12.74□□□□□ -0.37
PSEN1-220ENST00000557037 F5H5T6 163 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 SMAD6O43541 496 aaKnown RBP12.73□□□□□ -0.37
PSEN1-220ENST00000557037 LEFTY1O75610 366 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 GABBR2O75899 941 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 ENDOD1O94919 500 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 LTFP02788 710 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 GLB1P16278 677 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 RRM1P23921 792 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 IGFALSP35858 605 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 NADK2Q4G0N4 442 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 ZC3H12AQ5D1E8 599 aaKnown RBP12.73□□□□□ -0.37
PSEN1-220ENST00000557037 PIM3Q86V86 326 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 SLC34A3Q8N130 599 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 GPR156Q8NFN8 814 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 TAS1R2Q8TE23 839 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 CLEC4CQ8WTT0 213 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 PPP1R16AQ96I34 528 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 CCDC74BQ96LY2 380 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 CCDC114Q96M63 670 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 INTS2Q9H0H0 1204 aaKnown RBP12.73□□□□□ -0.37
PSEN1-220ENST00000557037 CNGB3Q9NQW8 809 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 CISHQ9NSE2 258 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 MAP10Q9P2G4 905 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 LRIT1Q9P2V4 623 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 IL36AQ9UHA7 158 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
PSEN1-220ENST00000557037 ITM2BQ9Y287 266 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 KCTD3Q9Y597 815 aa12.73□□□□□ -0.37
PSEN1-220ENST00000557037 MRPS18BQ9Y676 258 aaKnown RBP12.73□□□□□ -0.37
PSEN1-220ENST00000557037 ZNF106Q9H2Y7 1883 aaKnown RBP12.73□□□□□ -0.37
PSEN1-220ENST00000557037 NEMP1O14524 444 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 HGSO14964 777 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-220ENST00000557037 B4GAT1O43505 415 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 SNAP91O60641 907 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 CPNE6O95741 557 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 HK3P52790 923 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 OR1D5P58170 312 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 MC1RQ01726 317 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 CENPCQ03188 943 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 BST2Q10589 180 aaKnown RBP12.72□□□□□ -0.37
PSEN1-220ENST00000557037 ALG11Q2TAA5 492 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 ANKS6Q68DC2 871 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 NRSN1Q8IZ57 195 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 NLGN4XQ8N0W4 816 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 CCDC112Q8NEF3 446 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 DENND6BQ8NEG7 585 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 NLGN4YQ8NFZ3 816 aaPredicted RBP12.72□□□□□ -0.37
PSEN1-220ENST00000557037 CENPTQ96BT3 561 aa12.72□□□□□ -0.37
PSEN1-220ENST00000557037 C5orf34Q96MH7 638 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms