RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 A0A0J9YVX5 310 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 ARHGAP10A1A4S6 786 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 PLOD2O00469 737 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 MT-CYBP00156 380 aaPredicted RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 FYNP06241 537 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 NPY2RP49146 381 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 CSRP3P50461 194 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 CDH15P55291 814 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 TRIM25Q14258 630 aaKnown RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 MTX3Q5HYI7 312 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 PITRM1Q5JRX3 1037 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 MARCH8Q5T0T0 291 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 FAM43BQ6ZT52 329 aaPredicted RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 CHERPQ8IWX8 916 aaKnown RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 SIX6OS1Q8N1H7 587 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 CNTD1Q8N815 330 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 TXNDC5Q8NBS9 432 aaKnown RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 B3GALNT2Q8NCR0 500 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 HMGCLL1Q8TB92 370 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 RDH11Q8TC12 318 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 LPGAT1Q92604 370 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 ABTB1Q969K4 478 aaPredicted RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 TMEM79Q9BSE2 394 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 DUSP16Q9BY84 665 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 NOL11Q9H8H0 719 aaKnown RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 STAP1Q9ULZ2 295 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 ANKRD6Q9Y2G4 727 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 MAGEB16A2A368 324 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 PRORSD1PA6NEY8 169 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 YJEFN3A6XGL0 299 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 SLC22A2O15244 555 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 MAGEB3O15480 346 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 CAPNS1P04632 268 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 CKMT2P17540 419 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 HSPA13P48723 471 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 TKTL1P51854 596 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 PLK1P53350 603 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 GJA9P57773 515 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 SOX4Q06945 474 aaPredicted RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 IKBKEQ14164 716 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 HERC3Q15034 1050 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 USP41Q3LFD5 358 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 ESRP1Q6NXG1 681 aaKnown RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 ARMCX2Q7L311 632 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 HERC6Q8IVU3 1022 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 SLCO4A1Q96BD0 722 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 ASB9Q96DX5 294 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 GPR78Q96P69 363 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 CAMKK2Q96RR4 588 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 SLC39A3Q9BRY0 314 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 MED10Q9BTT4 135 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 OSBPL2Q9H1P3 480 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 POMKQ9H5K3 350 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 PLEKHA5Q9HAU0 1116 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 WDR6Q9NNW5 1121 aaKnown RBP11.53□□□□□ -0.56
SRP54-213ENST00000556994 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 SLC2A6Q9UGQ3 507 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 CROCCQ5TZA2 2017 aa11.53□□□□□ -0.56
SRP54-213ENST00000556994 SMIM28A0A1B0GU29 152 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 FAM95CA0A1B0GW59 222 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 SLCO1B7G3V0H7 640 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 H3BRB1 525 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 PIRO00625 290 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 FBP2O00757 339 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ADCYAP1R1P41586 468 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 NDST2P52849 883 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 CDH17Q12864 832 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 TMED1Q13445 227 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 RFTN1Q14699 578 aaPredicted RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 GRIK4Q16099 956 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 DCAF4L1Q3SXM0 396 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 AGKQ53H12 422 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 IL31Q6EBC2 164 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 SLC27A1Q6PCB7 646 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ARHGAP36Q6ZRI8 547 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 TRIM67Q6ZTA4 783 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 BNIPLQ7Z465 357 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 SPPL2BQ8TCT7 592 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 HEXDCQ8WVB3 486 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 EDEM1Q92611 657 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ELMO2Q96JJ3 720 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 OSMRQ99650 979 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 ULBP1Q9BZM6 244 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 CHST12Q9NRB3 414 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 DNAAF2Q9NVR5 837 aaKnown RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.52□□□□□ -0.57
SRP54-213ENST00000556994 FZD9O00144 591 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 AURKAO14965 403 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 HUS1O60921 280 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 TIPRLO75663 272 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 SLC25A27O95847 323 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 NCAM1P13591 858 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 STMN1P16949 149 aa11.52□□□□□ -0.57
SRP54-213ENST00000556994 NPR3P17342 541 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms