RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 KIAA0907Q7Z7F0 614 aaPredicted RBP24.08■■□□□ 1.45
SIX4-203ENST00000556952 CAND1Q86VP6 1230 aaKnown RBP24.08■■□□□ 1.45
SIX4-203ENST00000556952 AHI1Q8N157 1196 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 UBLCP1Q8WVY7 318 aaPredicted RBP24.08■■□□□ 1.45
SIX4-203ENST00000556952 EBF3Q9H4W6 596 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 INTS6Q9UL03 887 aaKnown RBP24.08■■□□□ 1.45
SIX4-203ENST00000556952 TICRRQ7Z2Z1 1910 aa24.08■■□□□ 1.45
SIX4-203ENST00000556952 COL4A2P08572 1712 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 ALOX15BO15296 676 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 TMCC1O94876 653 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 CD160O95971 181 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 MAGEA4P43358 317 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 MAXP61244 160 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 SULT2A1Q06520 285 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 SLC14A2Q15849 920 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 UAP1Q16222 522 aaPredicted RBP24.08■■□□□ 1.44
SIX4-203ENST00000556952 LINC00523Q86TU6 105 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 CPA6Q8N4T0 437 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 SPATA22Q8NHS9 363 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 LRRC39Q96DD0 335 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 ZFYVE19Q96K21 471 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 TTC25Q96NG3 672 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 ECT2Q9H8V3 914 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 DUSP12Q9UNI6 340 aa24.08■■□□□ 1.44
SIX4-203ENST00000556952 CES1P23141 567 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 SERPINH1P50454 418 aaKnown RBP24.07■■□□□ 1.44
SIX4-203ENST00000556952 ZXDAP98168 799 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 NR1H3Q13133 447 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 CYTH1Q15438 398 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 FUT11Q495W5 492 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 ASTLQ6HA08 431 aaPredicted RBP24.07■■□□□ 1.44
SIX4-203ENST00000556952 LINGO4Q6UY18 593 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 ZBED8Q8IZ13 594 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 TADA1Q96BN2 335 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 SEMA4AQ9H3S1 761 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 EPHX3Q9H6B9 360 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 HPS4Q9NQG7 708 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 ACTL7AQ9Y615 435 aa24.07■■□□□ 1.44
SIX4-203ENST00000556952 MUSKO15146 869 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 MT-CYBP00156 380 aaPredicted RBP24.06■■□□□ 1.44
SIX4-203ENST00000556952 DSC2Q02487 901 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 NIPAL4Q0D2K0 466 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 BBS9Q3SYG4 887 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 MSS51Q4VC12 460 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 CFAP58Q5T655 872 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 PRPF39Q86UA1 669 aaKnown RBP24.06■■□□□ 1.44
SIX4-203ENST00000556952 ETFBKMTQ8IXQ9 262 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 ARRDC2Q8TBH0 407 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 WFIKKN2Q8TEU8 576 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 SEMA3CQ99985 751 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 ACBD3Q9H3P7 528 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 UBP1Q9NZI7 540 aa24.06■■□□□ 1.44
SIX4-203ENST00000556952 RIPK2O43353 540 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 SASH3O75995 380 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 TTC4O95801 387 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 MMP2P08253 660 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 CD86P42081 329 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 DGKGP49619 791 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 NSUN2Q08J23 767 aaKnown RBP eCLIP24.05■■□□□ 1.44
SIX4-203ENST00000556952 ALS2CLQ60I27 953 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 DENND2CQ68D51 928 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.05■■□□□ 1.44
SIX4-203ENST00000556952 NAT16Q8N8M0 369 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 FSD1LQ9BXM9 530 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 CASS4Q9NQ75 786 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 NINJ2Q9NZG7 142 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 SLC25A13Q9UJS0 675 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 SLC27A6Q9Y2P4 619 aa24.05■■□□□ 1.44
SIX4-203ENST00000556952 SRFP11831 508 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 CR2P20023 1033 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 GRIA1P42261 906 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 RUNX3Q13761 415 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 SPARCL1Q14515 664 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 FASTKD3Q14CZ7 662 aaKnown RBP24.04■■□□□ 1.44
SIX4-203ENST00000556952 CCDC38Q502W7 563 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 RALGPS1Q5JS13 557 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 KDELC1Q6UW63 502 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 IPMKQ8NFU5 416 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 PYROXD1Q8WU10 500 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 EDAQ92838 391 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 NUDCD1Q96RS6 583 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 TBL1YQ9BQ87 522 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 EPB41L4BQ9H329 900 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 HS3ST2Q9Y278 367 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 TEX264Q9Y6I9 313 aa24.04■■□□□ 1.44
SIX4-203ENST00000556952 AVILO75366 819 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 SERPINF2P08697 491 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 ALADP13716 330 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 TSHRP16473 764 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 ADRA1AP35348 466 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 SKOR1P84550 965 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 ADIPOR2Q86V24 386 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 UBALD2Q8IYN6 164 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 MRGPRX2Q96LB1 330 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 C9orf72Q96LT7 481 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 TRMT61BQ9BVS5 477 aaKnown RBP24.03■■□□□ 1.44
SIX4-203ENST00000556952 LHX3Q9UBR4 397 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 TULP3O75386 442 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 PMPCBO75439 489 aa24.03■■□□□ 1.44
SIX4-203ENST00000556952 NUDT17P0C025 328 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms